QUARK Ab Initio Results for YBDD_ECOLI

Submitted Primary Sequence

>Length 65
MFDSLAKAGKYLGQAAKLMIGMPDYDNYVEHMRVNHPDQTPMTYEEFFRERQDARYGGKGGARCC
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--------10--------20--------30--------40--------50--------60

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MFDSLAKAGKYLGQAAKLMIGMPDYDNYVEHMRVNHPDQTPMTYEEFFRERQDARYGGKGGARCC
CHHHHHHHHHHHHHHHHHTTTTTTTHHHHHHHHHHTTTTCCCCHHHHHHHHHHHHTTTTCCCCCC
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--------10--------20--------30--------40--------50--------60

Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

Predicted Solvent Accessibility

>0-buried to 9-exposed
MFDSLAKAGKYLGQAAKLMIGMPDYDNYVEHMRVNHPDQTPMTYEEFFRERQDARYGGKGGARCC
32310130021002002100212101100200132014211211320021011231224222311
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--------10--------20--------30--------40--------50--------60

Download Predicted Solvent Accessibility

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.505 to 1su3B SCOP code=a.20.1.2	TM-score=0.585 to 1ixrB SCOP code=a.5.1.1	TM-score=0.470 to 1o3uA SCOP code=a.24.16.3	TM-score=0.549 to 2i5uA SCOP code=a.275.1.1	TM-score=0.579 to 2id3A SCOP code=a.4.1.9

Estimated TM-score of Model 1: 0.4742 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.5210 ±0.0778