QUARK Ab Initio Results for YBCD_ECOLI


  Submitted Primary Sequence

>Length 78
MVTNLYQNMRANALADAELRRKAADELTCMTARINRGETIPEPVKQLPVMGGRPLNRAQALAKIAEIKAKFGLKGASV
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--------10--------20--------30--------40--------50--------60--------70
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MVTNLYQNMRANALADAELRRKAADELTCMTARINRGETIPEPVKQLPVMGGRPLNRAQALAKIAEIKAKFGLKGASV
CHHHHHHHHHHTTTTHHHHHHHHHHHHHHHHHHHHCCCCCTTTTHHHHHHCCCCCCHHHHHHHHHHHHHHTTTTTTCC
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--------10--------20--------30--------40--------50--------60--------70
Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MVTNLYQNMRANALADAELRRKAADELTCMTARINRGETIPEPVKQLPVMGGRPLNRAQALAKIAEIKAKFGLKGASV
422300221222202222013201310110021033232023113202221223134220021002011312233334
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--------10--------20--------30--------40--------50--------60--------70
Download Predicted Solvent Accessibility

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.534 to 1p71A
SCOP code=a.55.1.1		 TM-score=0.514 to 1e9sF
SCOP code=c.37.1.11		 TM-score=0.540 to 1ef4A
SCOP code=a.4.11.1		 TM-score=0.552 to 1tuaA
SCOP code=d.51.1.1		 TM-score=0.546 to 1sf9A
SCOP code=b.34.15.1
Estimated TM-score of Model 1: 0.6172 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.6741 ±0.0778