QUARK Ab Initio Results for YAGN_ECOLI

Submitted Primary Sequence

>Length 146
MATPATVSIEPTLAAIRARWCINSSKTTQSFNDPASMEEVVEYLKGTYSALRKSVACAKLKILHLKQRMQNATNFLARLMSCKNQASRSHHSTAKSAKSALSSDSGDGSDPDPEPETFPSAFITTPTNSIMLKAFFANISITEVAK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MATPATVSIEPTLAAIRARWCINSSKTTQSFNDPASMEEVVEYLKGTYSALRKSVACAKLKILHLKQRMQNATNFLARLMSCKNQASRSHHSTAKSAKSALSSDSGDGSDPDPEPETFPSAFITTPTNSIMLKAFFANISITEVAK
CCCCCEEEECHHHHHHHHHHCCTTTTTTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTTHHHHHHCTTTTTTTTCCCCTTTTTTCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140

Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

Predicted Solvent Accessibility

>0-buried to 9-exposed
MATPATVSIEPTLAAIRARWCINSSKTTQSFNDPASMEEVVEYLKGTYSALRKSVACAKLKILHLKQRMQNATNFLARLMSCKNQASRSHHSTAKSAKSALSSDSGDGSDPDPEPETFPSAFITTPTNSIMLKAFFANISITEVAK
55321101111100001121111123223223122102200310320021023100001110120231022012000301203221131221223213222223223122222323211210110021001020000100123225
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140

Download Predicted Solvent Accessibility

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.580 to 2g38C SCOP code=a.25.4.1	TM-score=0.580 to 1gl2D SCOP code=h.1.15.1	TM-score=0.509 to 1h2sB SCOP code=f.17.4.1	TM-score=0.522 to 1z8lA SCOP code=a.48.2.1	TM-score=0.558 to 1wdfB SCOP code=h.3.3.1

Estimated TM-score of Model 1: 0.3721 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.4119 ±0.0778