QUARK Ab Initio Results for YACL_ECOLI

Submitted Primary Sequence

>Length 120
MDYEFLRDITGVVKVRMSMGHEVVGHWFNEEVKENLALLDEVEQAAHALKGSERSWQRAGHEYTLWMDGEEVMVRANQLEFAGDEMEEGMNYYDEESLSLCGVEDFLQVVAAYRNFVQQK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MDYEFLRDITGVVKVRMSMGHEVVGHWFNEEVKENLALLDEVEQAAHALKGSERSWQRAGHEYTLWMDGEEVMVRANQLEFAGDEMEEGMNYYDEESLSLCGVEDFLQVVAAYRNFVQQK
CCEEEEETTTTTEEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEETTTTTEEEETTTTTTEEEETTTTTTTTTTHHHHHHHTTTTTHTTTTHHHHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120

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Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

Predicted Solvent Accessibility

>0-buried to 9-exposed
MDYEFLRDITGVVKVRMSMGHEVVGHWFNEEVKENLALLDEVEQAAHALKGSERSWQRAGHEYTLWMDGEEVMVRANQLEFAGDEMEEGMNYYDEESLSLCGVEDFLQVVAAYRNFVQQK
532101112212010100210100010013204321200220020022132232102120210101012110002012132223202200211233110000020012002102212443
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120

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Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.480 to 1jyoA SCOP code=d.198.1.1	TM-score=0.488 to 2o6kB SCOP code=a.60.15.1	TM-score=0.453 to 1ig7A SCOP code=a.4.1.1	TM-score=0.459 to 1sqfA SCOP code=a.79.1.3	TM-score=0.459 to 1kmhA SCOP code=a.69.1.1

Estimated TM-score of Model 1: 0.3209 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.3570 ±0.0778