QUARK Ab Initio Results for ESSD_ECOLI


  Submitted Primary Sequence

>Length 71
MKSMDKLTTGVAYGTSAGSAGYWFLQLLDKVTPSQWAAIGVLGSLVFGLLTYLTNLYFKIKEDKRKAARGE
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--------10--------20--------30--------40--------50--------60--------70
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MKSMDKLTTGVAYGTSAGSAGYWFLQLLDKVTPSQWAAIGVLGSLVFGLLTYLTNLYFKIKEDKRKAARGE
CCHHHHHHHHHHHHHTTTTTHHHHHHHHTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTT
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--------10--------20--------30--------40--------50--------60--------70
Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MKSMDKLTTGVAYGTSAGSAGYWFLQLLDKVTPSQWAAIGVLGSLVFGLLTYLTNLYFKIKEDKRKAARGE
44122111100000011110010011001300121000000000001000100020012023233422534
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--------10--------20--------30--------40--------50--------60--------70
Download Predicted Solvent Accessibility

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.672 to 1usdA
SCOP code=h.1.29.1
TM-score=0.751 to 1g4yB
SCOP code=f.15.1.1
TM-score=0.578 to 2r2vA
SCOP code=h.1.3.1
TM-score=0.572 to 1mszA
SCOP code=d.68.7.1
TM-score=0.520 to 1olmE
SCOP code=a.5.3.1
Estimated TM-score of Model 1: 0.4481 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.4931 ±0.0778