Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| Seq | MGTEIQLKLGGLGLTYAKNHRGPDHGALFQPADRQRIRSDQVDYEYCEEEGEDPSPMEWAFARKLKHVVPRLQLLGFTIDLAREAYSNWVVDWKEERESLQDDDDPPIPEPLSFDEFCAFATRQSILDLDDTFLSGDEEWRDRRKPKGRFASDMAIIERIPIGFDHDDMAWSERSYFGSRVNILHPYLMLQILAGNAANLETDVTWQYGPLVENGYTAAAAFTPSARRTE |
1 | 5cwcA | 0.14 | 0.11 | 3.86 | 0.71 | SPARKS-K | | ----SEKEELRERLVKICVENAKRKGDDTEEAREAAREAFELVREAAERAGIDSSEVLELAIRLIKECVENAQREGYDISEACRAAAEAFKRVAEAAKRAG----------ITSSEVLELAIRLIKECVENAQREGYDI-------SEACRAAAEAFKRVAEGITSSETLKRAIEEIRKRVEEADISEACRQAAEEFRKKAEELKRR----------------------- |
2 | 1a2xA | 0.11 | 0.07 | 2.51 | 0.57 | FFAS-3D | | ---------------------------------------------------DQQAEARSYLSEEIAEFKAAFDMFGISVKELGTVMRMLKEELDAIIEEVDEDGSGT----IDFEEFLVMMVRQMKEDAKGKSEEELAECFRIFDRNADGYIDAEELAEIFRASGEH----VTDEEIESLMKDGD------------KNND-------------GRIDFDEFLKMMEGVQ |
3 | 2khnA | 0.10 | 0.04 | 1.62 | 0.25 | HHpred | | -------------------HHHHSHMAQFPTPFGGSLD------TWAITV-EERAKHDQQFFITGDQARNFFFQSGLPQPVLAQIWALA---------------DMNNDGRMDQVEFSIAMKLIKLKL-Q-GYQL-----------PSALP--PVMKQ------------------------------------------------------------------------ |
4 | 2c4nA | 0.11 | 0.10 | 3.47 | 0.64 | MUSTER | | TIKNVICDIDG--LMHDNVAVPGAAEFL------HGIMDKGLPLVLLTNYPS----------QTGQDLANRFATAGVDVP------DSVFYTSAMATADFLRRQEGKKAYVVGEGALIHELYKAGFTITDVNPDETRSYNWDMMHKAAYFVANGARF-IATNPDTHGRGFYPACGALCAGIEKISPWIIRAALNKMQANLRTDILLET--LVLSGVSSLDDIDSMPFRPS |
5 | 3efoB | 0.10 | 0.06 | 2.23 | 0.60 | CNFpred | | --GQRRLRIHNLGLNCSS-----QLADLYKSCETDAL--------------------------INFFAKSAFKAVHQPLKVIREILVNQTAHMLACYRKNC-ASQLILPDSKVLPVYMNCLLKNC------------------------------VLLSR------PEISTDERAYQRQLVMTMGVADSQLFFY--------PQLLPIHTLD------------------ |
6 | 1vt4I3 | 0.11 | 0.07 | 2.64 | 0.91 | HHsearch-2 | | -------------------EY--ALHRSIVDHYN--IPKTFDS---------DDLIPPYLDQYFYSHIGHHLKNIEHERTLFRMVFLDFRFLEQKIRHDSTA--WNASGSILNTLQQLKFYKPYI----CDNDPKY-----------ERLV--NAILDFLPKI------------EEN--LICSKYTDLLRIALMA-EDE-A---------------IFEEAHKQVQRGG |
7 | 4e40A | 0.08 | 0.07 | 2.95 | 0.92 | Neff-PPAS | | VSIASGILLRPAVIRNATTEFSRKKSEDILAKGGAAVERASAAVDRVSG-LDKTNETAQKVRKAAAVAHHALEHVKEEVEIVAKKVNEIIELTAGATEHAKGAKANGDASAVKVSNLLARAKESENQYVKEAAEECSEST----NYDVTAKSLAAALDKLPGVKEDN----AVKTTFQSILTSLDNLDKDVKSVEQRAEELETALEKAERQLEKAEKAAEEAETESSKV- |
8 | 5d50E | 0.09 | 0.03 | 1.14 | 0.41 | HHsearch | | ----------------------------------------FEER----IH-TPVGVRSLVEDSHLMKLLRELDKDGFNVDGPLAELVALVNYVTSSQMTM--------------QDLQTHLDYCAEQ-LRKQT---------------T--------------------------------------------------------------------------------- |
9 | 4dgkA | 0.11 | 0.10 | 3.49 | 0.65 | SP3 | | -----VYEDQGFTFDAGPTVITDAIEELFALAGKQLKEYVELLPVTPFYRLCWESGKVFNYDNDQTRLEAQIQQF---NPRDVEGYRQFLDYSRAVFKEGYLGTVPFLSFRDMLRAAPQLAKLQAWRSVYSKVASYIEDEHLRQA----FSFHSLLVGGNPTSSIYTLIHAL-EREWGVWFPRGGTGALVQGMIKLFQDLGGEVVLN---------ARVSHMETTGNKIE |
10 | 5xn7A1 | 0.06 | 0.06 | 2.50 | 0.76 | PROSPECTOR2 | | NLLVQEFEVRSTILLDNPQQKSIERFILFEQPDELFLNVELSVTELLDAAHVSGKVRGESYQQVIDALTEYHASTAEHADYELTSVEKLLNLRKQVEGYVLGHPDSGRVQANALNQVNSRLEAVSVLVVSEQSIKAHDSFSHLYDQLDNANLKESKHLYLDGNGDFVTKGKGNLANIDKLGGSDAVLEKVKAAVSHEYGQ------VVADTIFAGLSANDLAKDGKGEQH |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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