Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | TCAETAKLIRKALKEAFPGVKFSVKSHTYSGGASINVSWTDGPNADQVEAVAGHFKAAYFDGSIDYKGSIYHMMEGQSVHFGADFIFCERQYS |
1 | 4f5nA2 | 0.08 | 0.08 | 2.95 | 0.87 | SPARKS-K | | EMLQMQDIVLNEVKKVDSEYIATVCGAESSGDMDVLLTHPSFTSESLLHQVVEQLQKVHF--------ITDTSKGETKFMGVCQLIDIRLIPK |
2 | 1in0A | 0.25 | 0.16 | 4.99 | 0.54 | FFAS-3D | | --TEMAKKITKLVKDSKIKVQTQIQ------GEQVRVT---GKSRDDLQAVIQLVKSAELGQPFQFNNFR----------------------- |
3 | 4mt1A3 | 0.08 | 0.08 | 2.95 | 0.36 | HHpred | | DAVAVAGKLTGMMMGTLKDGFGIAVVPPPGSGLSINLQDRNNTGHTALLAKRNELIQKMSGLFDTVRAGGLETFNGYPS----MKLSAS---- |
4 | 3w5xA | 0.16 | 0.13 | 4.28 | 0.82 | MUSTER | | HMEAVQNRIVEAAERV-PGVHLRARYVGQDIWADMIIGVDPENTVEQAHEICEAVQAA-----------CGKIRRIESLHVSAEAR------- |
5 | 4u8yA | 0.07 | 0.04 | 1.75 | 0.63 | CNFpred | | KVEAITMRATRAFS-QIKDAMVFAFNLP-ATGFDFELIDQAGLGHEKLTQARNQLLA------------------------------------ |
6 | 5lq3A2 | 0.08 | 0.08 | 2.98 | 0.30 | HHsearch-2 | | SADQIIAELNKKF-AFDRNASSVFIGLPPSITGGFEMYVQNGKSYDEIQKDVNKLVAAQRKELSRVRTTLDTPFNLFPA----AQVQGQPGYT |
7 | 5ho1A | 0.08 | 0.06 | 2.56 | 0.80 | Neff-PPAS | | -MNDVLVDAYNIAKDS-QHVYIRGRNVGEDVHLDINIYVDADLKVFESDLVADAIRRKIEAEVDHVRDVHVGVTPVRI--------------- |
8 | 1ghhA | 0.11 | 0.08 | 2.69 | 0.42 | HHsearch | | AIDALAGELSRRIQYAFPDNEVSVRYAAA---NNLSVIGATKEDKQRISEILQEWESDDWFV-SE---------------------------- |
9 | 1jmsA | 0.09 | 0.09 | 3.32 | 0.76 | SP3 | | EAEAVSMLVKEAVVTFLPDALVTMRGKMTGHDVDFLITSPEATEQQLLHKVTDFWKQESTFEKFKQPSRKVDALDHFQKCFLILKLDHGRVHS |
10 | 3nybA1 | 0.19 | 0.18 | 5.88 | 0.44 | PROSPECTOR2 | | IRNQTISTIREAVKQLWPDADLHVSTDLYLPGSDIDCVVTSELGGKELYSLASHLKKKNLATEVEVVAKAREPHSGIHIA-----VSFERTNG |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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