Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | DGTLKVDKVNSINELTDADFENPTRNVELPAIPENVDKAIGANGKPVVIKKNIFEKNKKSHNFSNRQSRDILTNALYNTDLVGQTQPTKRPKHWVAIQLDEKSPITVLEVNENKDNVEVVGWYTLDNRNLERIKRQA |
1 | 4r7rA | 0.10 | 0.08 | 2.93 | 0.72 | SPARKS-K | | ------------------------AKPSLNYHTKNLSELV--SNIKIRLLDNI----YSEVIVDNEDV-RIIDDLLKSLKFINEEALPNKPLYKIFIDLNSEKYVIDIYPWDSDVRKDYLSLKDIPNSFKQYVFNK- |
2 | 5ja8A | 0.15 | 0.09 | 3.21 | 0.52 | FFAS-3D | | ------------------------------------------HMKSVFVESTIFEKYRDE-YLSDEEYRLFQAELMLNPK---LGDVIQGTGGLRKIRVASRGGSIIYYFLDEKRRFYLLTIYGLNANQRKQLMA-- |
3 | 3lorA | 0.11 | 0.10 | 3.69 | 0.61 | MUSTER | | DNELDVQEWVNHEGLSNEDLRG--KVVVVQLCPPQAQKIHRIDESQVQVIG--LHSVFEHHDVTPEALKVFIDEFIKFPVAVDPREGQRIP---STKKYRLEGTPSIILAD--RKG-RIRQVQFVDDFVLGLLLGSL |
4 | 1mpyA | 0.13 | 0.07 | 2.55 | 0.69 | CNFpred | | ---------------------------------------------HALMYGD-----------ELPATYDLFTKVL-GFYLAEQVLDENGTRVAQFLSLSTAHDVAFIHHP-EKGRLHHVSFHLETWEDLLRAADLI |
5 | 4w8jA | 0.23 | 0.14 | 4.35 | 0.32 | HHsearch-2 | | DLEIYLIRYNAKHNVPGTG-----------------------------------SSAHHSHHFSL-------------DIDVGSTDLNEDLGVWVIFKIKTQDGHARL------GNLEFLEEKPLVGEALARVKRAE |
6 | 4qanA2 | 0.08 | 0.08 | 3.13 | 0.66 | Neff-PPAS | | -----PISEKTPQRAVEQFIYAIEKGDLTRALAFATTESSQDTSPELLKKQGEYAKELKTLGKSEEQLNKLRGKLNPELIKVIPIETEENTEYAGLYSYNGKNYLTGYTLCRQEDGWQIQSLSAPAKEESRKTSEQS |
7 | 5lqwX7 | 0.04 | 0.01 | 0.74 | 0.29 | HHsearch | | -------------------------------------------------------------------------TS----MKSLDL-PSGSRAF--LALTSDSGNLSIVQIHAGALRLKTLVNQPLTR---------- |
8 | 3no3A | 0.13 | 0.12 | 4.27 | 0.61 | SP3 | | DNVLVVNDIQGIQSCTYDELKDLSNGEKLPTL-EQYLKRAKLKNIRLIFEL----KSHDTPERNRDAARLSVQVKRKLAKDYISFNDRLCPKSEVSYLNGELSPEL------KELGFTGLDYHYKVLQSHPDWVKDC |
9 | 4qanA2 | 0.10 | 0.10 | 3.76 | 0.51 | PROSPECTOR2 | | PISEKTPQIYAIEKGDLTRALAFATTESSQDTSPELLKKQGEYAKELKTLYGFLGTEDARLYGKSEEQLNKLRGKLNPEYIPIETEENTETVYAGLYSYNGKNYLTGYTLCRQEDGWQIQSLSALSKEESRKTSEQA |
10 | 2otxA | 0.20 | 0.17 | 5.36 | 0.41 | FFAS03 | | --TLKGENLSKKAKEKRESLIKKIKDVKSVYLQEFQFPPIAAQDLPFVIKAGYLEKRRKDHSFLGFEWQKRWCALSKTVFYYYGSDKDKQQKGEFAIDGYDVRMNNTLRKDGKKD---------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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