Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | PGKLDTVLSSPPVHKALQLLKKKKVLNPSQWGKLYPAIKSSVSSQHFDITLLMVLLRNICGLVPPATGWNTLPPAADTTLEADIIRIKYYRDKVYGHAIEASVDDASFNQHWMDIRGALVRLGGARYQGDIDNLKKEGMDPEIEEHY |
1 | 4q2sA | 0.15 | 0.13 | 4.34 | 0.80 | SPARKS-K | | LRRLKEYVKAGSVKECVAEWCNMP--SVAGFDVLS-EISYDRMLENCSNLLLLTFIYHISLLDS----------VDDDRLSKRMEYISRICLNI-------DVNDPKVHPVLTLTREALLRQSSPIFKRRLVVLLRALDGKISEI-- |
2 | 5j8eA | 0.13 | 0.11 | 3.77 | 0.77 | FFAS-3D | | ---------RAELCESLL-----------TWIQTFNVDAPCQTVEDLNGVVMAQVLQKIDPAYFDENWLNRIKTEVGDNWRLKISNLKKILKGILDYNHEIHSDAAELGRMLQLILGCAVN--CEQKQEYIQAIMM--MEESVQHV- |
3 | 3brjB | 0.11 | 0.07 | 2.71 | 0.36 | HHpred | | ---RGFFIATDVFNESIDGLIQRIFRKQSVVGPLLQDSGP---LGDLSVR--LKLLFGLGVLP--------------DDIYHDIEDIIKLKNHL-NSDADYEFTDPNILEPIKKLHLVKKGVQL----------------------- |
4 | 6anrA | 0.12 | 0.11 | 3.86 | 0.75 | MUSTER | | PSSKEELIKANSNFSLLNKKLES--ITPQLAFEPLLEGHAKGTT-GWGELVLHWHDQEAKGKTIIFPEWNELGREDITEYEVLLARLKENKQQLVALIE--RFSNDELYGKWYNRGRMIQFNTAKNASGRLNKLQKC-LAE------ |
5 | 3gb8A | 0.07 | 0.07 | 2.82 | 0.59 | CNFpred | | --PLGYIFETKLISTLIYKFLNVPMFRNVSLKCLTEIAVSVSQYEEQFVTLFTLTMMQLKQMLPLNTNIRLAYSNGKDDEQNFIQNLSLFLCTFLKEHDQLIEKRLNLRETLMEALHYMLLVS-EIFKICLEYWNHLAAELYRESPF |
6 | 1vt4I3 | 0.14 | 0.12 | 4.18 | 0.87 | HHsearch-2 | | EYALHRSIVDHYN--IPKTFDSDDLIPPYLDQYFYSHIGHRMTLFRMVFLDFRFLEQKIRHD---STAWNASG-----SILNTLQQLKFYKPYI-------CDNDPKYERLVNAILDFLPKIEESKYT-DLLRIAMAEDEAIFEEAH |
7 | 5h7cA2 | 0.12 | 0.12 | 4.06 | 0.69 | Neff-PPAS | | ----DKEEVIEIVKELAELAKQSTDSLVNEIVKQLAEVAKEATDKELVIYIVKILAELAKQSTDSELVNEIVKQLAEVAKEATDKELVIYIVKILAELAKQSTDSELVNEIVKQLEEVAKEATDKELVEHIEKILEELKKQS----- |
8 | 3brjB | 0.13 | 0.11 | 3.80 | 0.62 | HHsearch | | PSVRGFFIAVDVFNESIDGLIQRIFRKQSVVGPLLQDSGP---LGDLSVR--LKLLFGLGVLP--------------DDIYHDIEDIIKLKNHL-NSDADYEFTDPNILEPIKKLHLVKKGVQLDRQQQIIKSGLSLAIVEICNEL- |
9 | 4wpxA | 0.12 | 0.11 | 3.87 | 0.66 | SP3 | | PREDYNKL-SDEQKTRISEAFELGLLSYEEFRFVLRALGFDLPKQQ--TYDMLVRHG------QRPANWPHDQECPPVYRQFNLATAQALAGTLIRQRDPRDELRRAFRLFEDDLRKVCQQVGNNIPDADIQAMIEE-FDSNGKGGV |
10 | 2plrA | 0.16 | 0.16 | 5.40 | 0.60 | PROSPECTOR2 | | KKGLKDWIESDWIHDIIKEAKKKDLLTPLTFSLIHILPLKSGFIVISDRYIYTAYARDSVRGVDIDYSFAIKPDITRVSPDIALERIKKSKRKIKPQEAGADIFEEGFLKYQGLITEVYDKLGTKTPKEIQIQIRKF-VGELIDNSF |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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