Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | ELLKEKARGELSNFVVSALPVFASNIPPQVRNNIAKSFSDRFEQNMKPAFDKEFAECTHDITDNKVLFNCYIDWLSDFLLNLGINTKKLEKDDNHCLQFINCPWLKEAGSSPMFCLICRAMVIRSFTWTNMRGNVEQTLCMADGAGKCNFEFKF |
1 | 1wc8A | 0.09 | 0.08 | 3.24 | 1.12 | SPARKS-K | | TESKKMSSELFTLTYGALVTQLCKDYEN------DEDVNKQLDRMGYNIGVRLIEDFLARSNVGCHDFRETADVIAKAFKMYLITPSITNAGDEFSLILENNPLVDFVHSALIYSNLLCGVLRGALEMVQMAVEAKFVQDTLKGDGVTEIRMRF |
2 | 2o0cA | 0.10 | 0.09 | 3.38 | 1.13 | FFAS-3D | | --MYGLVNKAIQDMISKTWEAIKQKASDDVTYHLVGAASEVLAEELLIAFGEYWVTYTSEEGYGELLLPEFMENLDNLHARVPPAFECQHSSKSMELHYQS--------TRCGLAPMVLGLLHGLGKRFQTKVEVTQTAFRETGEDHDIFSIK- |
3 | 2osoA | 0.14 | 0.12 | 4.22 | 1.00 | MUSTER | | KIFPDILEAI-----NEEIIKESKKIP-PYFGLFALVIFDKVKETSLYEIGEEFGKLSPKN----------IEELKKIFKLNFGDLEIDENNPPYKIKLSNPPY-QWVSKEEPIHDFIAGILAGCLEEIFYYFVVNEVECVSQGKDKCVFEVKE |
4 | 5fruA | 0.09 | 0.08 | 3.18 | 1.17 | HHsearch-2 | | ILLHTAALGALRKELVDTLG-------MERARGLFMRMGFHSGVRDAELAKTM---RS-G-HSDFGMLEM----GPCLHTIEGVRVTPNIAAGHGEFLWEDSFEGDVGVAQAPVCWMQIGYATGYTSALMKTILYRELECVGCGHPHCRILGKP |
5 | 2o0cA | 0.07 | 0.06 | 2.64 | 1.02 | Neff-PPAS | | --------DDVTYHLVGAASEVLGKPAEELLIAFGEYWVTYTSEE---GYGELLASAGDSLPEFMENLDNLHARVGLSFPQLRPAFECQHTSSKSMELHYQ-------STRCGLAPMVLGLLHGLGKRFQTKVEVTQTAFRETGEDHDIFSIKY |
6 | 2osoA | 0.15 | 0.14 | 4.58 | 1.94 | HHsearch | | -GAFEKIFPDILEAIREEIIKESKKIP-PYFGLFALVIFDKVK-GSLYEIGEEFGKLS--PKNI--------EELKKIFKL-NGDLEIDEKNPPYKIKLSNPPY-QWVSKEEPIHDFIAGILAGCLEEIFYYFVVNEVECVSQGKDKCVFEVK- |
7 | 2bjnB | 0.10 | 0.09 | 3.38 | 1.12 | SPARKS-K | | --GSMADEALFLLLHNEMVSGVYKSAEQGEVEN--GRCITKLENMGFRVGQGLIERFTKDTADELDIMKFICDFWTTVFK-KQIDNLRTNHQGIYVLQDNKFRLLTHAS---KYLAFTCGLIRGGLSNLGIKSIVTAEVS---SMPACKFQVMI |
8 | 2kilA | 0.15 | 0.14 | 4.61 | 1.12 | FFAS-3D | | --MKGIIFNVLEDMVVSVWNELLEKHAESELFSIVQDVVKAFGQFLFNGLASRHTDVVDKFDDFTSLVMGIHDVIGLEVNKLYHENGQLLPNNQIALRYS---------SPRRLCFCAEGLLFGAAQHFQQKIQISHDTCMHTGADHCMLIIEL |
9 | 2osoA | 0.14 | 0.12 | 4.21 | 1.17 | HHsearch-2 | | KIFP-----DILEAIREEIIKESKKIP-PYFGLFALVIFDKVK-GSLYEIGEEFGKLS--PKNIE--------ELKKIFKL-NGDLEIDEKNPPYKIKLSNPPY-QWVSKEEPIHDFIAGILAGCLEEIFYYFVVNEVECVSQGKDKCVFEVKE |
10 | 5fruA | 0.09 | 0.08 | 3.17 | 1.81 | HHsearch | | ILLHTAALGALRKELVDTL-------GMERARGLFMRMGFHSGVRDAELAK----TMRSG-HSDFGMLEM----GPCLHTIEGVRVTPNIAAGHGEFLWEDSFEGDVGVAQAPVCWMQIGYATGYTSALMKTILYRELECVGCGHPHCRILGK- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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