Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280
| | | | | | | | | | | | | | |
| Seq | FKTAFPRLATGKYVHFIMIRHSQSFPVFQTDGILNTARTQAGLSNTEKISRLVMFKRKQTTPERLAGRELLRSVGLTSADKTADNLCEYNGEGTCKKCPDCIIYGFAIGDSGSERSKVYSDSAFSLSPYEESHRSFTFNAPFEGGTMSEAGEMRSAINELDHILPEVTFPTVETLRDSTYEGFIYVLGNLLRTRRYGAQETRTGTMSNHLIGIVFADGEIFSNLYFTQALYDALKLKGDINAPINDICVEAKNVAETLLNQEPVRKSQVIFEPDLQTLLTEVSSIYQNEEDLTNTLT |
1 | 4txdA | 0.16 | 0.15 | 4.91 | 2.43 | SPARKS-K | | IGDKDRIFPKAHRIEVVFLVRAANYLLLRTEGAGTINMTTLEYSG-GAMEVPVIQPQKLMAVTRRQMLQLLREYRDSLDEVSEEWNCTI--QGMDGFCPHCTIFGAALTEQHNIKTRVRFDPAFATQRR---ITPETHN----KVTEGHLSMTGQALFSEVHVEPGTVFIGRAELVDLTEPELVATLYSLATLRELGGRSGIYGTVRVEILGVKAGKYASTTAYDLAAENA---------GKGYEEVKKNLKERLEKLG-------FTPVDNSKLLAAVDLFKDLWRSSIDFAEKMV |
2 | 4txdA | 0.16 | 0.15 | 4.92 | 2.60 | FFAS-3D | | IGDKDRIFPKAHRIEVVFLVRAANYLLLRTEGAGTINMTTLEY-SGGAMEVPVIQPQKLMAVTRRQMLQLLREYRDSLDEKKVSEEWNCTIQGMDGFCPHCTIFGAALTEQHGIKTRVRFDPAFATQRR---ITPETHNKVTEGHLSMT----GQALFSEVHVEPGTVFIGRAELVDLTEPELVATLYSLATLRELGGRSGIYGTVRVEILGVKAGKYASTTAYDLAAENAG---------KGYEEVKKNLKERLEKL-------GFTPVDNSKLLAAVDLFKDLWRSSIDFAEKM- |
3 | 4txdA | 0.17 | 0.15 | 5.07 | 6.46 | HHpred | | IGDKDRIFPKAHRIEVVFLVRAANYLLLRTEGTINMT--TLEYSG-GAMEVPVIQPQKLMAVTRRQMLQLLREYRDSLDEVSEEWNCTI--QGMDGFCPHCTIFGAALTEQHNIKTRVRFDPAFATQRR---ITPETHNVTEGHLSM-----TGQALFSEVHVEPGTVFIGRAELVDLTEPELVATLYSLATLRELGGRSGIYGTVRVEILGVKAGKYASTTAYDLAAENAGKGY---------EEVKKNLKERLEKL----------GFTPVDNSKLLGLFKDLWRSSIDFAEKMV |
4 | 4txdA | 0.17 | 0.15 | 5.11 | 2.13 | MUSTER | | IGDKDRIFPKAHRIEVVFLVRAANYLLLRTEGAGTINMTTLEYSGG-AMEVPVIQPQKLMAVTRRQMLQLLREYRDSLDEKKVSEEWNCTIQGMDGFCPHCTIFGAALTEQHNIKTRVRFDPAFATQRR---ITPETHNVTEGHLS-----MTGQALFSEVHVEPGTVFIGRAELVDLTEPELVATLYSLATLRELGGRSGIYGTVRVEILGVKAGKYASTTAYDLAAENAG---------KGYEEVKKNLKERLEKLG--TPVDNSKLLAAVDHKDPNGLFKDLWRSSIDFAEKMV |
5 | 4txdA | 0.17 | 0.16 | 5.19 | 2.20 | CNFpred | | IGDKDRIFPKAHRIEVVFLVRAANYLLLRTEGTINMTTLEYS---GGAMEVPVIQPQKLMAVTRRQMLQLLREYRDS-KKVSEEWNCTIQ--GMDGFCPHCTIFGAALTESIGIKTRVRFDPAFATQRRI---TPETHNKTEGHLSMT-----GQALFSEVHVEPGTVFIGRAELVDLTEPELVATLYSLATLRELGGRSGIYGTVRVEILGVKAGKYASTTAYDLAAENAGK---------GYEEVKKNLKERLEKLGF-TPVDNSKLLAAVDHKDPNGLFKDLWRSSIDFAEKMV |
6 | 4txdA | 0.17 | 0.15 | 5.07 | 4.69 | HHsearch-2 | | IGDKDRIFPKAHRIEVVFLVRAANYLLLRTEGTINMT--TLEYSG-GAMEVPVIQPQKLMAVTRRQMLQLLREYRDSLDEVSEEWNCTI--QGMDGFCPHCTIFGAALTEQHNIKTRVRFDPAFATQRR---ITPETHNVTEGHLSM-----TGQALFSEVHVEPGTVFIGRAELVDLTEPELVATLYSLATLRELGGRSGIYGTVRVEILGVKAGKYASTTAYDLAAENAGKGY---------EEVKKNLKERLEKL-----G-----FTPVDNSKLLGLFKDLWRSSIDFAEKMV |
7 | 4txdA | 0.17 | 0.16 | 5.21 | 3.21 | Neff-PPAS | | IGDKDRIFPKAHRIEVVFLVRAANYLLLRTEGAGTINMTTLEYSG-GAMEVPVIQPQKLMAVTRRQMLQLLREYRDSLGFKKVSEEWNCTIQGMDGFCPHCTIFGAALTEQHGIKTRVRFDPAFATQRR---ITPETHN----KVTEGHLSMTGQALFSEVHVEPGTVFIGRAELVDLTEPELVATLYSLATLRELGGRSGIYGTVRVEILGVKAGKYASTTAYDLAAENAG---------KGYEEVKKNLKERLEKLG-FTPVDNSKLLAAVDHKDPNGLFKDLWRSSIDFAEKMV |
8 | 4txdA | 0.17 | 0.15 | 5.07 | 7.58 | HHsearch | | IGDKDRIFPKAHRIEVVFLVRAANYLLLRTEGTINMT--TLEYSG-GAMEVPVIQPQKLMAVTRRQMLQLLREYRDSLDEVSEEWNCTI-Q-GMDGFCPHCTIFGAALTEQHNIKTRVRFDPAFATQRR---ITPETHNVTEGHLSM-----TGQALFSEVHVEPGTVFIGRAELVDLTEPELVATLYSLATLRELGGRSGIYGTVRVEILGVKAGKYASTTAYDLAAENAGKGY---------EEVKKNLKERLEKL-----G-----FTPVDNSKLLGLFKDLWRSSIDFAEKM- |
9 | 4txdA | 0.17 | 0.15 | 5.09 | 2.69 | PROSPECTOR2 | | IGDKDRIFPKAHRIEVVFLVRAANYLLLRTEGAGTINMTTLEYSG-GAMEVPVIQPQKLMAVTRRQMLQLLREYRDSLDEKKVSEEWNCTIQGMDGFCPHCTIFGAALTEQHGIKTRVRFDPAFATQRR---ITPETHNKTEGHLSM-----TGQALFSEVHVEPGTVFIGRAELVDLTEPELVATLYSLATLRELGGRSGIYGTVRVEILGVKAGKYASTTAYDLAAE---------NAGKGYEEVKKNLKERLEKL----------GFTPVDNSKLLAAFKDLWRSSIDFAEKMG |
10 | 4txdA | 0.16 | 0.15 | 5.02 | 3.40 | SAM | | -GDKDRIFPKAHRIEVVFLVRAANYLLLRTEGAGTINMTTLEYSG-GAMEVPVIQPQKLMAVTRRQMLQLLREYRDSLKKVSEEWNCTI-Q-GMDGFCPHCTIFGAALTEQHNIKTRVRFDPAFATQRR---ITPETHNVTEGHLSM-----TGQALFSEVHVEPGTVFIGRAELVDLTEPELVATLYSLATLRELGGRSGIYGTVRVEILGVKAGKYASTTAYDLAAENAGKGY---------EEVKKNLKERLEKLGFTPVD-NSKLLAAVDHKDPNGLFKDLWRSSIDFAEKMV |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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