Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | YSYSFTESTTFTVTHARHMAAKVATDLKRMQRFYGKPSDESIADYETEATEMLRAGYLDTVTYGFKKDGKWIEPTLRYTSRDLAGASANDDDPGKIRPGADVGGASFYSYMTYTAAWDRLSQTERDAFKASLPFSRGGAPEPGISGYLSNDRTYSSGGRALDRATVR |
1 | 3abeC | 0.09 | 0.08 | 3.18 | 0.94 | SPARKS-K | | ----------FGQVVADVLCEFLEVAVHLILYVREVYPVGIIQDTLHCVKPLLEKNDVEKVVVVILDKEHRPVEKFVFEITQPSDSLLSHQLLAAFVLDHNPPGCTFTVLVHTREA----ATRNMEKIQVIKDFPWILADEQDVHMHDPRLKTMTSDILKMQLYVEE |
2 | 3abeC | 0.10 | 0.09 | 3.31 | 0.63 | FFAS-3D | | ----------FGQVVADVLCEFLEVAVHLILYVREVYPVGIIQDTLHCVKPLLEKNDVEKVVVVILDKEHRPVEKFVFEITQPISSDSLLSHVEQLVLDHNPPGCTFTVLVHTREA----ATRNMEKIQVIKDFPWILADEHMHDPRLIPLKTMTSDILKMQ----- |
3 | 2v64A | 0.08 | 0.07 | 2.79 | 0.39 | HHpred | | -----SREQGITLRGSAEIVAFFSFGINSILYQRGIYPIKYLNNVVEQLKDWLYKCSVQKLVVVISNEGEVL-ERWQFDIECDKT-AKDDSAPRETFLPLLEVSCSFDLLIYTDKDL-------------VVPEKWEESGPQFINSEEVRLRSFTTTIHKVN----- |
4 | 6f9gA | 0.13 | 0.12 | 4.16 | 0.72 | MUSTER | | RQRLQAHAET-QALRIQRYFMDAYQYGNGFARLVQVLKDRGGSDLRAELTRQARA---------SLAGNPDVI-GLYLVFQPNALDQQDSHYLGQDAMGSNESGRFSLYWSQPSPGTLELEAMPETMLGDTSIGSNGAAKNRWLTCPQDTARTCMLE-DEVNGRQVL |
5 | 4extC | 0.11 | 0.08 | 2.82 | 0.64 | CNFpred | | --------------VADVLCEFLEVAVHLILYVREV-LNQYIQDTLHCVKPLLEKNDVEKVVVVILDKEHRPVEKFVFEITQLLRAFIISVCDAVLDHNP--PGCTFTVLVHTREA----ATRNMEKIQVIKDFPWILADE-------------------------- |
6 | 5ovnA1 | 0.13 | 0.09 | 3.13 | 0.54 | HHsearch-2 | | ------------------------------QIKQWPLTNEKIEALTEIVERLEREGKVKRADVFAKKSGKWR-MLIDFRELN-KL--TEKGAQLGLPHPAGLQIKKQVTVLDIGDAYFTIPLDPDYA--PYTAFTLPRKNGP-------------GRRFVWCSLPQG |
7 | 3zc4A | 0.05 | 0.05 | 2.19 | 0.74 | Neff-PPAS | | -AETISKRFWTLIKLRFYVVLRRFGYIDPLIYSDPKQIKDVLSEALREFVSYTSSSSSRSIVIYDDPNPVTAQAPCLVVAKRDEIPQNFPSIYRYTIYKIDKSSEYCISPLVVNATLITPNESVIKEFFDKLDSNIQYARVLASLAVGGE----------------- |
8 | 2v64A | 0.09 | 0.08 | 3.01 | 0.61 | HHsearch | | GSALLSREQGITLRGSAEIVAEFSFGINSILYQRGIYPIKYLNNVVEQLKDWLYKCSVQKLVVVISNEGEVL-ERWQFDIECDKT-AKDDSAPREKFLPLLEVSCSFDLLIYTDKDL-------------VVPEKWEESGPQFINSEEVRLRSFTTTIHKVNSMVA- |
9 | 4eacA | 0.17 | 0.16 | 5.31 | 0.64 | SP3 | | ALHHIPNGEVWSVEEILKRKAIIEDALVHEDIKTHTGNEQWIANYQQTLRNLAQCG-IRTVCYNFMPVLDWTRTDLEYVLPDGSKALRFDKRPGAEADYTEEEIAQAA------ERFATMSDEDKARLTRNIIAGLPGAEEGYTLDQFRKHLELYKD---IDKAKLR |
10 | 3e4oA | 0.12 | 0.11 | 3.81 | 0.71 | PROSPECTOR2 | | AG---------LAGQSRIDASLKASLLRAIRGALLSPDRPSLDRINRKLEALATSAEAAVIYL-IDRSGVAV-----AASNWQEPTSFVGNDYGAEHFAGTVSKRPGLYIITSLPSWKPIAEDRLAPIRESLQFGDAPLLPLPFRKIEARPDGSST--LDALLPGDS |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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