>PF17826 (369 residues) WLLGGEFEDAVFEERRERRPGPAAPYCAKRCEPQWFDEETGSSDDVEALTLKKFKGDLAY RRQEYQKALQEYSSISEKLPATNFAMKRDVQEGQARCLAHLGRHTEALEIATNLENKATN TDHLTTVLYLQLAICSSLQNLEKTILCLQKLISLHPFNPWNWGKLAEAYLNLGPALSTSC ASSQKQNSFTSSDKTIKSSFPHSGKDCLLCFPETLPESSVFSMEASSSNNQKNEKALKNI QNCMAERREAVLLETQMKACASFIRTRLLLQLTQSQQTSFALEKNLRTQQEIEDKMKGFS FKEDTLLLIAEVMGEDIVPEKIKDEVHTEVKCVGSTALTALVIASSKEFEDKWFKKIKDH FCPFENQFH |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | WLLGGEFEDAVFEERRERRPGPAAPYCAKRCEPQWFDEETGSSDDVEALTLKKFKGDLAYRRQEYQKALQEYSSISEKLPATNFAMKRDVQEGQARCLAHLGRHTEALEIATNLENKATNTDHLTTVLYLQLAICSSLQNLEKTILCLQKLISLHPFNPWNWGKLAEAYLNLGPALSTSCASSQKQNSFTSSDKTIKSSFPHSGKDCLLCFPETLPESSVFSMEASSSNNQKNEKALKNIQNCMAERREAVLLETQMKACASFIRTRLLLQLTQSQQTSFALEKNLRTQQEIEDKMKGFSFKEDTLLLIAEVMGEDIVPEKIKDEVHTEVKCVGSTALTALVIASSKEFEDKWFKKIKDHFCPFENQFH | |||||||||||||||||||
1 | 4hnwA1 | 0.11 | 0.08 | 2.96 | 1.12 | SPARKS-K | -------------------------------------------IALKKENDQFLEALKLYEGKQYKKSLKLLDAILKKDGSH-----VDSLALKGLDLYSVGEKDDAASYVANAIRKIESAS--PICCHVLGIYMRNTKEYKESIKWFTAALNNGSTNKQIYRDLATLQSQIGDF-----------------KNALVSRKKYWEAF---------LGYRANWTSVAQDVNGERQQAINTLSQFEKLAEGKISDEKYEHSECLMYKNDIMYKAASDNQ-----DKLQNVLKHLNDIEPCVFDKFGLLERKATIYMKLGQLKDASIVNPD-----NFKYYKLLEVSLDNKLKKALYGKLEQFYPRCEPPKF | |||||||||||||
2 | 4a1sA | 0.09 | 0.07 | 2.47 | 1.36 | FFAS-3D | --------------------------------------------GSSMCLELALEGERLCNAGDCRAGVAFFQAAIQAGT-EDLRTLSAIYSQLGNAYFYLGDYNKAMQYHKHLAKSMNDRLGEAKSSGNLGNTLKVMGRFDEAAICCERHLTLARQEGRALYNLGNVYHAKGKHLGQRNPGKFGDD-----------------------------------------VKEALTRAVEFYQENLKLMRDLGDRGAQGRACGNLGNTYYFQAAIEHHQERLRIAREFRANSNLGNSHIFLGQFEDAAEHYKRTLA---LAVELGEREV------EAQSCYSLGFNTAIEYHNRHLAIAQE---------- | |||||||||||||
3 | 5efrA | 0.11 | 0.07 | 2.63 | 1.07 | HHpred | -----KTKEHVIRRELYTI--PGQTFSRDYFNQEAL-AAGEEVGRHSSPQEAFERAMEFYNQGKYDRAIEYFKAVFTYGRTH--EWAADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQAEYERAMCYYKLTDTRKAIEAFQLFIDRYPNHELVQYEAARLYERRELYEAAAVT-------Y---EAVFDA-Y---------------P------------------------------------DTPW-ADDALVGAMRAYIAYAEQSVRARQPERYRRAVELYERLLQIFPDSPTAEELYTRARQR------------------------------------------------------ | |||||||||||||
4 | 1w3bA | 0.14 | 0.13 | 4.41 | 1.26 | MUSTER | EYQAGDFEARHCMQLWRQEPDNTGVLLLLHFQCRRLDRTLAIKQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDF-----IDGYINLAAALVAAGDMEGAVQAYVSALQY---NPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAI----HHFEKAVTLDPNFLDAYINLGN---VLKEARIFDRAVAAYLRALSLSPNHAVVHGLIDLAIDTYRRAIELQ---FPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLGNIEEAVRLYRKAL--------VFPEF--------AAAHSNLASVLQQQ-LQEALMHYKEAI-RISPTFA | |||||||||||||
5 | 4gyoA | 0.13 | 0.09 | 3.00 | 1.15 | CNFpred | --------------------------------------------GLLEYYFYYFRGMYEFKQKNFILAIDHYKHAEEKLEYEDEIEKAEFLFKVAEVYYHIKQTYFSMNYASQALDIYTYGRRRVQCEFIIAGNLTDVYHHEKALTHLCSALEHARMIAAAYYNVGHCKYSLG------------------------------------------------------------------DYKEAEGYFKTAAAIFQQAVQAVFSLTHIYCKEGKYDKAVEAYDRGIKSAAEWEDDM-----YLTKFRLIHELYLGSGDLNVLT------------ECFDLLESRQLLADAEDLLHDTAERFNQLEHYES | |||||||||||||
6 | 5mgxE | 0.15 | 0.07 | 2.37 | 0.41 | HHsearch-2 | SLNGTRVQEEEFTLGGETAADSKYCYGPQGRSPYILVDGLTGQERVALANRKRECGNAHYQRADFVLAANSYDLAIKAITSSAKQLKVKCLNNLAASQLKLDHYRAALRSCSLVLEHQ--PD-NIKALFRKGKVLAQQGEYSEAIPILRAALKLEPSNKTIHAELSKLVKKHAAQ-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
7 | 1hz4A | 0.11 | 0.10 | 3.60 | 1.70 | Neff-PPAS | -------------------------------------EIKDIREDTMHAEFNALRAQVAINDGNPDEAERLAKLALEELPPGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMARVWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLIPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQPQQQLQARGDLDNARSQLNRLEHSDWISNANKVRVIYWQMTGDKAAAANWLRHTAKPEFANNHFLQGQWRNIARAQILLGEFEPAEIVLEELNENARSLR----LMSDLNRNLLLLNQLYWQAGRKSDAQRVLLDALKLANRTGFISHFVIEGEAMAQQLRQLIQLNTLPELEQHR | |||||||||||||
8 | 6hftA1 | 0.12 | 0.05 | 1.90 | 0.53 | HHsearch | ---------------------------------------AYEGEPHEIAENFKKQGNELYKAKRFKDARELYSKGLAVECE-DKSINESLYANRAACELELKNYRRCIEDCSKALTINP--KN-VKCYYRTSKAFFQLNKLEEAKSAATFAQRIDPENKSILNMLSVIDRKEQELKAKEEKQQR------------------------------------------------------------EAQEREN-------------KKIMLESAMTL--------RN---------------I-------------------------------------------------------------------- | |||||||||||||
9 | 5aemA | 0.09 | 0.08 | 3.05 | 1.13 | PROSPECTOR2 | LFVRNDLQVRLFNEVIKKDARN--------------------------FAAYETLGDIYQLQGRLNDCCNSWFLAAHLNASD-----WEFWKIVAILSADLDHVRQAIYCFSRVISLNPMEWE---SIYRRSMLYKKTGQLARALDGFQRLYMYNPYDANILRELAILYVEAILAALENALDSSMFPDINWKKIDAKYKCIPFDWSSLNWIQRRESQTFWDHVPDDSEFDNRRFKNSTFDSLLAAEKEKSYNIPID----IRVRLGLLRLNTDNLVEALNHFQCVADLYFEAATALTRAEKYKEAIDFFTPLLSLE--------------EWRTTDVFKPLYETAKEFYELLDIRVSLAEVYYRLNDPD | |||||||||||||
10 | 6n3qF | 0.17 | 0.06 | 1.88 | 0.76 | SAM | ------------------------------------------EALSKMIKGLFESGMKNLQQKKLNEALKNVSLAIEMAQRKRAPWLHFMLRSKIDLCLILGKHLEALQDLDFLLGTGL---IQPDVFVRKADCLLKLRQWEEARATCERGLALAPEDMKLRALLIETARNL----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |