Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | CQFETREIDGDNSPVSVETDTESATNVQVFDSFGARFNSNLQAKDQVYSQRFPCISSKLDYIIGREKTEAIETKPDDIPEYQEGRKSFGYNQTYRRQFPPIVYEDPYQVSLRYMEKHHILQIFQQITENLVYEKPEDPLSFMLCQI |
1 | 4f9kA | 0.26 | 0.07 | 2.11 | 1.74 | HHsearch-2 | | -----------------------------------------------------------------------------------------------------------KGCELYVQLHGIQQVLKDCIVHLCISKPERP-KFLREHF |
2 | 6r24A | 0.10 | 0.09 | 3.32 | 1.09 | Neff-PPAS | | LNMSMISWPNDASRIVYCRRHLLNPAAQWANDFVQEQGILEITFDTFIQGLYQHFYKPPDINKIFNAITQLSEAKLGIERLNQRF-RKIWDRMPPDFMTEKAAIMTYTRLLT-----------KETYNIVRMHKPETLKDAMEEAY |
3 | 4f9kA | 0.27 | 0.07 | 2.10 | 1.93 | HHsearch | | -----------------------------------------------------------------------------------------------------------KGCELYVQLHGIQQVLKDCIVHLCISKPERP-KFLREH- |
4 | 5wtjA | 0.15 | 0.15 | 5.05 | 0.99 | SPARKS-K | | RNRILHAISKERDLQGTQDDYNKVINIIQNLKISDEEVSKALNLDVVFKDKKNIITKINDIKISEENNNDIKYLP-SFSKVLPEILNLYRNNPKNEPFDTIETEKIVLNALIYVNKELYKKLILE--DDLENESKNIFLQELKKTL |
5 | 3im4A | 0.25 | 0.06 | 1.91 | 0.61 | FFAS-3D | | -----------------------------------------------------------------------------------------------------------RECELYVQKHNIQALLKDSIVQLCTARPERPMAFLR--- |
6 | 3im4A | 0.22 | 0.06 | 1.95 | 0.82 | HHpred | | ---------------------------------------------------------------------------------------------------------SLRECELYVQKHNIQALLKDSIVQLCTARPERPMAFLREYF |
7 | 6e10a | 0.13 | 0.13 | 4.48 | 0.75 | MUSTER | | -SVKDIKKLIEEGILDYEDLTENELRAKPDDNFYELSPYASDEKDLSLNETSGLTNEQLKNFLGQNGTYHMSYDSKSIDYAKQKKSEKKEDQQEDDD----GFYDAYKQIKNSYDGHEAPQLINNYVFTSIYDTKENLIKFLKKNS |
8 | 5vh9A | 0.06 | 0.01 | 0.60 | 0.43 | CNFpred | | ------------------------------------------------------------------------------------------------------------TRVDEILWLLYQEVYCQFSTALD----KFKMIMAMTMF |
9 | 3im4A | 0.22 | 0.06 | 1.95 | 1.29 | HHsearch-2 | | ---------------------------------------------------------------------------------------------------------SLRECELYVQKHNIQALLKDSIVQLCTARPERPMAFLREYF |
10 | 3jc8Oa | 0.09 | 0.09 | 3.38 | 0.95 | Neff-PPAS | | --IQPTEEEIGWAVAERRKLDLELADKSEIAQNLNERRREMDVLEQKLSEALTELPEQRDIEELLAQINDIGKKSGELSSVTPGKESVGGGEFFARIPIKMTVSGNYHEIALFLQEMANMRRIVNV-NNIKFDSAKLKNEKVVLQS |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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