Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | RVIDANINRLREGLRVSEDICRFALNDETLSQQLKALRHQVKQASDLIAPYPQLLHARDVQSDVGAATPNKDEDQRDNIQRILAANMKRTQECCRVLEEFAKLYSNEAASTFKTMRYNLYALEKN |
1 | 5cwfA | 0.15 | 0.15 | 5.10 | 1.14 | SPARKS-K | | AKKNNDDEVAREIERAAKEIVEALNNSDEMAKVMLALAKAVLLAAKNNDDAREIARAAAEIVEALRENNSDEAKVMLALAKAVLLAAKVAREIARAAAEIVENNSDEMAKKMLELAKRVLDAAKN |
2 | 5cwpA2 | 0.12 | 0.10 | 3.39 | 1.10 | SP3 | | -------------------------SSLKLIVEAIEAAVRALEAAERTGDPEVRELARELVRLAVEAAEEVQRNSSEEVNEALKKIVKAIQEAVESLREAEESGDEKARERVREAVERAEEVQRD |
3 | 5cwjA | 0.10 | 0.10 | 3.53 | 1.07 | SPARKS-K | | LKEARKSGTEESLRQAIEDVAQLASQDSEVLEEAIRVILRIAKESGSEEALRQAIRAVAEIAKE--------AQDSEVLEEAIRVILRIAKESIRAVAEIAKAQDPRVLEEAIRVIRQIAEESGS |
4 | 1z6oX | 0.07 | 0.07 | 2.93 | 0.83 | FFAS-3D | | -SMRQQIQMEVGASLQYLAMGAHFVNRPGFAQLFFDAASEEREHAMKLIEYLLMRGELTNDVSSLLQVRPPTRSSWKGGVEALEHALSMESDVTKSIRNVIKACEEEQYKGQRDLAGKASTLKK- |
5 | 6egcA | 0.21 | 0.19 | 6.10 | 0.22 | HHpred | | ---EELAKRLKELLRELERLQREGSSDEDVRELLREIKELVEEIEKLAREQKYLVEE---LKRQGNEIIRELE---RSLR-EQEELAKRLKELLRELERLQREGSSDVRELLREIKELVEEIEKL |
6 | 3va9A | 0.11 | 0.10 | 3.78 | 0.95 | MUSTER | | NKALLAISAIQQAVLEAETSERGFLGIETYRDSYIRARDALAARLD---GLRAVLADNPEQIAHIDELRLLTDMRMAQLGRVVELPERMREALDILEQARVDRLTERIETSLSVLTRAEQALLIQ |
7 | 5cwoA | 0.12 | 0.10 | 3.39 | 0.68 | CNFpred | | DLFRAALELVRAVIEAIEEAVKQG--NPELVEWVARAAKVAAEVIKV------AIQAEKE-----------------GNRDLFRAALELVRAVIEAIEEAVKQGNPELVERVARLAKKAAELIKR |
8 | 6gmhQ | 0.15 | 0.14 | 4.59 | 0.42 | HHsearch-2 | | TDIQGALSAYGTATRILQEKVADV--PPEILNNVGALHFRLGNLGEKKY-FLASLDRAKA------EAEHD-EHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNYVDCYMARDKGNFYEASDW |
9 | 3kyjA | 0.08 | 0.08 | 3.15 | 0.91 | Neff-PPAS | | EIWALYADDGAQALDAMEASLLALQAGEDAAAHVGPLFRAVHTFKGNSRGLSVVESRAHLCEDLIGLVRDAGVPMDGEIVEILLFASDTLRAMLEETAASRADVETGSEALMDQLRSKIARCSR- |
10 | 5h7cA3 | 0.11 | 0.08 | 2.91 | 0.50 | HHsearch | | -----DSELVIYIVKILAELAKQSTDS----ELVNEIVKQLAEVAKAT-DKELVIYIVKILAELAKQSTDS--------E--------LVNEIVKQLEEVAKEATDKVEHIEKILE----ELEQ- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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