Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | MFMLRNVSKYLFGDSSKESIVEVPQGQLYLVRPLSVKGYSELIFKDAAASIRRTGQDFQYQLVIQRAYEEGERELLGEDEEEDGATEGLGAEKDERTFLLDEALRFRTDVRQTGEKVFAWKDLSGDEGDLWEFVCDSSVQPPTVATFEVVAVQCQYERKYRRSHQQATEQDLQQFS |
1 | 1k5gH | 0.08 | 0.06 | 2.44 | 0.78 | SPARKS-K | | PIVSLPEQEIKTLEEDEEELF-KMRAKLFRFASENDLPEW----KEGDVKLLKHKEKGAIRLLMRR----------------------DKTLKICANHYITPMMEL--KPNAGSDRAWVWNTFADECPKPELLAIRFL-NAENAQKFKTKFEECRKEIEEREK------------- |
2 | 4c0aA2 | 0.14 | 0.11 | 3.85 | 0.64 | FFAS-3D | | ---VQKVEKLIVGLGCLPHRRLVCYCRLFEVPDLGLHQREIFLFND--------------LLVVTKIFQKK---------------KNSVTYSFRQSFSLYG-MQVLLFENQYYPNGIRLTSSVPGADIKVLINFNAP-NPQDRKKFTDDLRESIAEVQEMEKHR--IESELEK-- |
3 | 3ksyA1 | 0.10 | 0.08 | 2.97 | 0.70 | MUSTER | | IKKMNEIQKNIDGW-EGKDIGQ-CCNEGTLTRVGAKHERHIFLFDG--------------LMICCKS----------NHGQPRLPGASNAEYRLKEKFFM-RKVQINDKDDTNEYK-HAFE-IILKDENSVIFSAK---SAEEKNNWMAALISLQYRSTLERMLDVTMLQEEKEEQ |
4 | 2y8fA | 0.08 | 0.05 | 2.01 | 0.87 | CNFpred | | -----------------SNVLQMQ-CKLFVFDKT-SQSWVERGR--GLLRLNDMAGTLQSRLVMRTQG-----------------------LRLILNTKLWAQMQIDKASE--KSIRITAMDTED--QGVKVFLISA--SSKDTGQLYAALHHRILALRSR--------------- |
5 | 3jc8Pa | 0.20 | 0.09 | 2.72 | 0.33 | HHsearch-2 | | SFDLDKLVAVVTGDASPVAMVEDPAGRGHIVRRNTRMGKVTQILRDSVTVTEVFNGEIIKNPVTLQLKPDAKQD------------------------------------------------------------------------------------------------------ |
6 | 4nuyA2 | 0.08 | 0.08 | 3.14 | 0.78 | Neff-PPAS | | -SADPVNARKVFGSETDNISLGWDSKQSIIFKLKEDGLIKHWRFFNDSARNPETTNKPIQEASLQIFNIKDYNLDNLLENPNKFDDEKYWITVDTYSAQGERATAFSNTLNNITSKYWRVVFDTKGDRYSSPVVPELQILGYPLPNADTIMKTVTTAKELSQQKDKFSQKMLDELK |
7 | 3mx7A | 0.21 | 0.09 | 2.70 | 0.41 | HHsearch | | MTDLVAVWDFEHGTSGKRV-VY-VDGKEEIRKEWKLVGKETFYVGKATINIDASGFAYEYTLEINGKSL------KK--------------------YM----------------------------------------------------------------------------- |
8 | 3okgA | 0.08 | 0.07 | 2.67 | 0.57 | SP3 | | ELLMQTALAEVFPHPGAD----------------LPPGWRWVRLGEVCDIIMGQSPPSS-----TYNFEGNGLPFFQGKADFGDLHPTPRIWCSAPQKVARPG-DVLISVRAPVGSTNVANLACCIGRGLAALRPRDSLERFWLLYYLHYLEPELS--------KAITKKDLQNVF |
9 | 4n0gC | 0.08 | 0.06 | 2.25 | 0.60 | PROSPECTOR2 | | QKILRSFDKPQAYQRFVKSCTMRGKGSVRDVTLVSGFPADFSTER----LEELDDESHVMVVSIIG--------------------GNHRLVNYKSKTKV--------VASPEKKTVVVES---------YVVDVPEGTSEEDTIFFVDNIIRYNLTSL---------AKLTKKMM |
10 | 5o5gA2 | 0.16 | 0.07 | 2.27 | 0.49 | FFAS03 | | ---------------------------------------------------------------------------------------------SNLAVTVDDSAEFKCEARGDPVPTVRWRKDDGEPKSRYEIRDDHTLKIRKVTAGDMGSYTCVAENMVGKAEASAT-------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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