Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| Seq | GSPTTAGYYGVRRSFTTELDFHNTKQFVSDVYSSPLGSKPFSCDSSATQGYPALLDPYLTNQYGDYRATPLTAGTSSFFSPSSVPPLLPSFPNDTAHFLLREPWEQTSPDSLSQADGACSDPLQALPASTSCLSSHESGGVSPYRSSGWTSAIPGAQSYPLHPLEDVHYSPSYAATPPCSFSPFMTVANELTSRMSHLSPEQSSETLPLHDNSAWAKEDGSPIWGTYEGRRTY |
1 | 5fvmC | 0.12 | 0.12 | 4.21 | 1.13 | SPARKS-K | | LTGVCSRTIQHADSQVNRLEITSDKKY--LAAAGHLHVRLYDIRSNNPNGHKGNVTSIAFQQENRWPSVQRNYKHNAPVAIHPNQGELISCDQDGN-IRIWDLGENQCTNQLTPEDNTPLQSLSVASDGSMLVAGNNKGNCYVWRMPHHTDASTLEPVTKFKSHTKYITRVLLSADVKN----LATCSADHTARVWNIEDNDGHQRWVWDDSAYLVTSDHYVLWDLSEIVRQY |
2 | 2nbiA | 0.11 | 0.11 | 4.01 | 1.21 | MUSTER | | DECFLPYSDASRPPSCLSFGRPDCDVLPTPQNINCPRCCATECRPDNPMFTPSP-DGSPPICSPTMLPTNQPTPPEPSSAPSDCGEVIEECPLDTCFLPTSDPARPPDCTAVGRPDPFPNNLGCPACCPFECSPDNPMFTPSPDGSPPNCSPTMLPTPQPSTPTVITSPAPSSQPSQCAEVIEQCPIDECFLPYGDSSRPLDCTDPAVNRDVLPTPQNINCPACCAFECRPDN |
3 | 1dgiR | 0.10 | 0.10 | 3.63 | 1.92 | Neff-PPAS | | NMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLRFGLRVEDEGNYTCLFVTFPQGSRSVDIWLRVLAKPQNTAEV--------QKVQLTGEPVPMARCVSTGGRPPAQITWHSDLGGMPNTSQVPGFLSGTVTVTSLWILVPSSQVDEHESFEKPQLLTVNLTVYYPPEVSISGYDNNWYLGQNEAPEPTGYNWSTTMGPLPPFAVAQGAQL |
4 | 4k0mC | 0.11 | 0.09 | 3.13 | 1.38 | PROSPECTOR2 | | ------------KVYTIDEAARTAKFDETVEVHAKLGIDPRRSDQNVRGTVS------LPHGLGKQVRVLAIAKGEKIKEAEEAGADYVGGEE-------------IIQAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA------------ |
5 | 6f1tg | 0.09 | 0.09 | 3.42 | 1.10 | SPARKS-K | | YPELLVASYNNNEDAPHEPDWNMKYKKTTPEYVFHCQSAVMSATFAKFHPNLVVGGTYSGQIVLWDNRSNKRTPVQRTPLSAAAHTVVGTQNAHNLISISTDGWSLDMLSHPQDSMELKAVAVTSMSDVNNFVVGSEEGSVYTACRHGSKAGISEMFEGHQGPITGIHCHAA--VGAVDFSHLFVTSSFDWTVKLKPLYSFEDNAGYVYD--VMWSPTHPALFACVDGMGRLD |
6 | 2xd8A3 | 0.11 | 0.09 | 3.26 | 0.58 | FFAS-3D | | ---------------ATDKYALYLKLFSGEMFKG--------FQHETIAR-------------DLVTKRTLKNGKSLQFIYTGRMTSSFHTPGTPI--LGNADKAPPVAEKTIVMDDLLISSASATNFVEPGGTQIRVGSGTNESDAFTASALVNAFYDAAAAMDEKGPFLGKYGVKYG--GTTGETSPGNLGSHIGPTPENANATGGVNNDYGTNAELGAKSCGLIFQKEAA |
7 | 5vlbA1 | 0.15 | 0.03 | 1.01 | 0.34 | HHpred | | -----------------------------------NVKDAEKWES-FIENASVFLGSWTPESVGDYASGVLPTYGYARMYS-GV----------------------------------------------------------------------------------------------------------------------------------------------------- |
8 | 2nbiA1 | 0.11 | 0.11 | 4.01 | 1.18 | MUSTER | | DECFLPYSDASRPPSCLSFGRPDCDVLPTPQNINCPRCCATECRPDNPMFTPSP-DGSPPICSPTMLPTNQPTPPEPSSAPSDCGEVIEECPLDTCFLPTSDPARPPDCTAVGRPDPFPNNLGCPACCPFECSPDNPMFTPSPDGSPPNCSPTMLPTPQPSTPTVITSPAPSSQPSQCAEVIEQCPIDECFLPYGDSSRPLDCTDPAVNRDVLPTPQNINCPACCAFECRPDN |
9 | 5bx9A2 | 0.26 | 0.06 | 1.72 | 0.53 | HHsearch-2 | | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HMEIQVLKAPRAVKLRPADPPVTEDLPDSIGWTREDGRNFWSARGGNVRL |
10 | 6e5p2 | 0.11 | 0.09 | 3.40 | 1.62 | Neff-PPAS | | -------------------------VESGGGLVKAGGSLILSCGVSNFRISAHTMNWVRRVPGGGLEWVASISTSSTYRDYADAVKGRFTVSRDDLEDFVYLQMHKMRVERKGSDRLSDNDPFDAWGPGTVVTVSPASTKGPSVFPLAPSSKSTSGGTAALG----------CLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNH |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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