Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | MFPRPVLNSRAQAILLPQPPNMLDHRQWPPRLASFPFTKTGMLSRATSVLAGLTAHLWDLGGGAGRRTSKAQRVHPQPSHQRQPPPPQHPGPYQERIWVGGEGWGEVGGLRLSKVGRRDREVGRGLRAPAGRGRAMGGMPRMGTVGDFGQALSSLAWTSTCFQDFCLPSLPGKLPAPLISKQQFLSNSSRSLFN |
1 | 3j2k71 | 0.04 | 0.04 | 2.03 | 0.81 | SPARKS-K | | ------------PKPKSVVAPPGAPKKEHVNVVFIGHVDAG----KSTIGGQIMYLTGMVDKRTLEKYEREAKEWYLSWALDTNQEERDKGKTVEYFETEKKHFTILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLDDPTVNWSNLVPFLKKVGFNPKKDIH |
2 | 3j4bA | 0.10 | 0.09 | 3.25 | 0.44 | FFAS-3D | | ----SAVNDILASI-GEPPVSTLEGDANAD------------AANARRILNKINRQI--QSRGWTFNIEEGITLLPDVYSNLIVYSDDYLSLMST----SGQSIYVNRGGYVYDRTSQSDRFDSGITVNIIRLRDYDEMPECFRYWIVTKASRQFNNRFFGAPEVEGVLQEEEDEARRLCMEYEMDYGGYNMLD |
3 | 3e59D | 0.21 | 0.05 | 1.63 | 0.32 | HHpred | | -------------------------------------------------------------------------------------------------------------------------------------------------RIEQVQLPRIAAFIEAGEEFVLPAFPAKSPNPGK-VLDSRPDMAERLS- |
4 | 3gv2A | 0.13 | 0.13 | 4.45 | 0.75 | MUSTER | | --P-IVQNLQGQMVHQAISPRTLNAWVKVVEEKAFSPEVIPMFSALSEGAT-LNTMLNTVGGHQAAMQMLKETINEEAAEDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTHNPPIPVGEIYKRWLGLNKIVRMYSPTSILDIRQGPKEPFRDYVDKTLRAEQASQEVAATTILKALGPGA-TLEE |
5 | 5iqiA | 0.07 | 0.02 | 0.63 | 0.32 | CNFpred | | -----------SILGYKEIGTFLTPEIYSTM-------SEEEQNLLKRDIASFLRQMHGL-------------------------------------------------------------------------------------------------------------------------------------- |
6 | 4uedB | 0.23 | 0.04 | 1.29 | 0.45 | HHsearch-2 | | ------------------------------------------------------------------------------------------------------------------------------------------MTR--IIYDRKFLMECRNSPVTKTPPRDLPTIPGVTS------------------- |
7 | 3jc8Na | 0.10 | 0.09 | 3.28 | 0.99 | Neff-PPAS | | MMIR--IN------LLPVR--------AVKKREMGRQVLVLFAVVLIGAGVANYLWYDDRQSELEAHQAGVASTKARIAELEKIIGEVKNINTRKAEVEKKLAVLDALRKGRSGPVRMMDALASATPKKVWNNNAVGSAVSHDEVAEFMRGLNGVVWTPKGMGRLVDRRRDSKTARVEMLTSDATIEEFPEAQV |
8 | 4py5A2 | 0.19 | 0.06 | 1.84 | 0.53 | HHsearch | | ----------------------------------------------------------------------------------------------ELPRIG------------------CNEAGKGEFGPLVVA-------------C-------IVADEKGVKDSKLSNLDKFSVARLEVRPK--AEDDLAVA- |
9 | 6fmlG | 0.10 | 0.10 | 3.64 | 0.57 | SP3 | | WTPENIRSSLEGIENFTWLRFVDTSLQEAYRASHTDVFARAVDLASKQNRLGHMQIVYDEPEDKKWTPVHALFQICERENPKAVAEITTEGVLRDLMNIARVKYRELGLCRLEKAARPRASAPPIEVVCDSRSAVIERENIMFHPAMRKALFGPTPSEIKEASFGPRPVTLYPPRALLPAPDHDKQRFTNITVP |
10 | 4k0mC | 0.07 | 0.07 | 2.73 | 0.98 | PROSPECTOR2 | | KVTAKFDETVEVHAKLGIDPRRSDQNVRGTVSLPHGLGKQVRV----------------LAIAKGEKIKEAEEAGADYVGGEEIIQAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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