Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| Seq | MALVQALVPREREPKLSILQMDRGDPQHSSHWCPEREKVKLLTLKPRETSKNILINFYRAFNLDKDVFIHQANHPLTVPSSVVMGDNGHTLAEDDKRPCFRVLPCYLERVSSGISISWISAPLPVGAMKHQLLCDLMDLITLSFWLAGQCMSLKATNMQHCKCSIATSDWAIELDRTDYKTLPSEYSILALLQVFAGKNCMDRVLLHVDVNYLKSLP |
1 | 6djyA | 0.21 | 0.19 | 6.01 | 0.62 | SPARKS-K | | KQMIQQVAINEQENELTPLSMPTGKPMLGYVPLNEVATSKFFSNVNDFDRDNQLAMAH-----FPDTTITQA---YNLTNS--IKPGDTSLPDAEQPPMDNVMYWACQFLSSGTSVEIVFSGFKFSNLRSPILCPYYDLITLKSLLTYLCLCTETRNMDTGE-----YVWKVRDVVSRNHTPAQNVEKFYTIQNAKYMIQLVHVLLFPLTDNK---- |
2 | 4pmxA2 | 0.15 | 0.09 | 2.95 | 0.39 | FFAS-3D | | --------------------------------------------PLAATASKFLGCAYG---------AQQAPGFAQYWNKLTPEVQEH-AFETTPEVAVSVHRDNLDALAAPIYITEFDLDGPTDAQQLADYKRVFPVFW---------------EHPAVH-GITLWGFRPYLIRADGTERPALTWLRDYVAAHPG-------------------- |
3 | 4qxaB | 0.20 | 0.12 | 3.68 | 0.26 | HHpred | | --LVQPRDDMEAPGYLSLHQTAD---VMTLKWTPNQLMNGS--VGDLDYEKSVYWDYAVTIRLEEIVYLHCHQQV-DSGGTVVL-----VSQDGIQRPPFRFPK--------------------GGHLLQFLSC-LENGL-L----PHGQLDPPLWSRGKGKV------------------------------------------------------ |
4 | 3a79A | 0.18 | 0.17 | 5.55 | 0.48 | MUSTER | | ESFNELLKLLRYILELSEVEFDDCTLNGLGDFNP--SESDVVSELGKVETVTIRRLHIPQFYLFYD--LSTVYSLLEKVKRITVENSKVFLV-----PCSFSQHLSLEFLSELMVEEYLKNSACKGAWPSQTLNHLRSMQKTGEILLT-LKNLTSLDISRNTFHMDSCQWPLNLSSTGIRVVKT--CIPQTLEVLVSNNNLDSFLQELYINKLKTLP |
5 | 3p7oA | 0.10 | 0.05 | 1.89 | 0.69 | CNFpred | | --------------------------------------------------------------------------------------------------MSKLWFKQDDKFFLPKACLNFEFFSPVDPLHCNMAYLYLELLKDSLNEYAYAAELA-----GLSYDLQNTIYGMYLSVKGYN-DKQPILLKKITEKMATFEIDKKRFEIIKEAYMRSLN |
6 | 2pffB | 0.20 | 0.19 | 6.21 | 0.77 | HHsearch-2 | | MDLEVLLVPTASFFIASQLQFNKILPEPTEGPTTPAELVGFLGVEPSQFDQVLNLCLYLEGNDIHALKLLQENDTTLVKTKELI-KNYITARIMAKRPFDKKSALFRAVGEGNAQLVAIF---GGQGNTDDYFEELRDLYQTYHVLAETLSELIRTTLDAEKVGLNILEWLENPSNTPDKDIPISCPLIGVIQLFVSVRKAITVLFFIGVRCYEAYP |
7 | 3jvdB | 0.10 | 0.10 | 3.73 | 0.52 | Neff-PPAS | | SESLQTIQQDLKAAGYQMLVAEANSVQAQDVVMEISIQAAGIIHVPVAPEGIPMVQLTRGELGPGFPRVLCDDEAGFFQLTESVLGGSGMVGEESLSTTQERMRGISHAASIYGAEVTFHFGHYEEMAQVVFNNGLPDLIVASPRLMAGVMRFTRLNVRVPHVVIGGYDDPEWYSFVPHEEM-GKEAVRLLVDLIENPEPTGDVVLQGQVILRGSST |
8 | 5vbnB2 | 0.23 | 0.08 | 2.45 | 0.36 | HHsearch | | ----------------------------------------------------------------------------------------------------------------------------SSAIEMTLVEVLQKKLMA-FTLCLKCRGVKETSMPYCSCA---GDFALTIHT---------QVFMEQIGIFRN------IAQHYGMSYLLEN- |
9 | 4r58A | 0.16 | 0.14 | 4.62 | 0.47 | SP3 | | TPIKQIF-PDDAFAETIKANLKKKSVTDAV---TQNELNSIDQIIANNSDIKSVQGIQYLPNL-KTLKLSN-NKQLNNLGWLDLSNNGTDISALKNLASLHTL--DL----SNNGITDISALKNLDNLHT-LLNGITDISALK-----NLDNLHTLDLSNNGITISAKNLTLDLSNNGITDISALKNLDNLETLDLRNNGIT------DKSALKNLN |
10 | 4dtdA | 0.09 | 0.09 | 3.49 | 0.67 | PROSPECTOR2 | | TKATPVVAPANSAQKFGYVKSAQGDALFLTKDNQGSYQRPPSLQDGKNYQNWQTHTVELVSYPDGRFVIEITNAKHVIAAGNGISAESQGQTITTPSGQQATVGVAAKGFGTSATPELESAPWYQKSLKSQFASLTKELAANVFAYLTSIYLKTAELAKKFGIYINEWDPSEQITPNANGLTDPKVKNAWPSKIVEILSKSDAKAVKHIKPQLQSRT |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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