Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | MEQQKEGTMPERNNLFLPSPGTESWPPAPFPALHPSLLGTPDPAHLGLPESLASVTVPIRLDALSYFLHSALMGAYSYQQSLPSCPCTSPPPQGTARRLYRGRGGWEVRCRPGRGQGQRRWGLGRAEQAERGWMEGSRAGPKNPPATPPSSTPPAQDGKKETQGLEPPLETPPAEDWEAEY |
1 | 5jcss | 0.08 | 0.08 | 3.00 | 1.10 | SPARKS-K | | RINEDHQKDSSNKIYNLNMIGMRIWNVIELEEPSEEDLTHILAQKFPILTNLIPKLI----------------DSYKNVKSIYMNTKFISLNKGAHTRVVSVRCERILFKNNGINKPDQLIQSSVYDSIFSEAADCFAGAIGEFKSLDIASSRISLFLTQHVPTLENLDDSIKIGRAVLLK |
2 | 4k0mC | 0.09 | 0.09 | 3.36 | 1.07 | MUSTER | | ARTAKFDETVEVHAKLGIDPRRSDQNVRGTVSLPHGLGKQVRVLAIAKGEKIKEAEEA----GADYVGGEEIIQAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
3 | 6e5p2 | 0.13 | 0.13 | 4.41 | 1.33 | Neff-PPAS | | --ESGGGLVKAGGSLILSCGVSNFRISAHTGLEWVASISTSSTYRDYADAVKGRFTVSRDDLEDFVYLQ--MHKMRVEDTAIYYCARKGSDRLSDNDPFDAWGPGTVVTVSPASTKGPSVFPLAPSSKSTSGGTLVKDYFPEPVALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTY |
4 | 1mv3A | 0.16 | 0.13 | 4.24 | 1.18 | PROSPECTOR2 | | DGSPAATPEIRVNHEPEPAGGATPGATLPKSPSQLRKGPPVPPP----------------------------------PKHTPSKEVKQEQILSLFEDTFVPEISVTTPSQPAEASEVAGGTQPAAGAQEPGETAASEAASSSLPAVVVETFPATVNGTVEGGSGAGRLDLPPESDWNQHP |
5 | 5yfpC2 | 0.05 | 0.05 | 2.34 | 1.06 | SPARKS-K | | FLLTSARDFQEQVVVMAKEATEDAQRTVMKLFSRLSGIISKFDKLLDGIVEMARAEQISLAIRLFKIYDLEEREDLRIEAIRNIIKKKEIEIEKSSIKKLPNSKNTARLQDETPKVIEYPTNKGLYQEIMSGTISTRTAPRGYKHFLINGINNSISEMFGEMREKYVGDQKFDLDNMDWIF |
6 | 5o9zH | 0.16 | 0.14 | 4.60 | 0.51 | FFAS-3D | | LGAQRKTLSGFSSTSVLPHTG--------YIYHSDIVQSLPPDLRRKAARLVAACTLAARVDKVGYELKDEIERKFDKWQEPPPVK-QVKPLPAPLDGQRKKRGGRRYRNRMSFGEIEEDFSLGHLGKSGSGRVRQTQVNEATKARISKTLQRTLQKQSVVYGGKS--------------- |
7 | 5xy3C | 0.18 | 0.09 | 3.07 | 0.28 | HHpred | | ------------------------------------QDQK--ASTIELPKV---FDTPIRAEVVKEVYVNLAK---NAQQPH---ANDPMKKV-SAISWGTGRAKACVPRVNGSGSNRNGQGAY-----ANFCRGGHRFNPPTLLRRWF-------------------------------- |
8 | 1jvrA | 0.17 | 0.13 | 4.19 | 1.05 | MUSTER | | --HMGQIHGLSPTPIPKAPRGLSTHHWLNFLQAAYRLQPGPSDF---------------DFQQLRRFLKLALKT------PIWLNPIDY---SLLASLIPKGY----------PGRVVEIINILVKNQVSPSAPAAPVPTPICPTTTPPPPPPPSPEAHVPPPYVEPTTTQCF-------- |
9 | 3kb9A | 0.15 | 0.03 | 1.11 | 0.44 | CNFpred | | -------------------------------------------SGCELPDAVRKHPAYRRAALLSQEFAAWYNDLCSLPKEI--------------------------------------------------------------------------------------------------- |
10 | 6ajfA | 0.12 | 0.08 | 2.93 | 0.45 | HHsearch-2 | | LGPRVDALGVTGISEYLPP-DN------------AVRQSQEQDKLF--PGFTEPLTLVMKREDGEPIQIADMRAK--A-LTVSGF---TDPD-------NDPEKMWKERPANDS---------------------GS-KDPSVRVIQNGENRNDAAKKIDELRALQP------PHGIEVFV |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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