Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| Seq | MVRIWTTIMIVLILLRIGPNKSSLSGRQAPTQAQTSDLVPSLFPLGLWAPGFCTWSSPDEDRVWRKPVRGTGNRDSGTRRRLQDATKQDPRPGNDVASAETAGPPSPAGIRAQDRAPRHRRAPPARMPVAPAPSADGGERRARAGRADAEPGWGDPLFQQNPHRSRARRGPGRATAAGALHISTPPPEPLQERGGGLFHRTRSVYNGLELNTWMKVERLFVEKFHQSFSLDN |
1 | 6e5p2 | 0.12 | 0.10 | 3.51 | 1.14 | Neff-PPAS | | --------------------EVQLVE-SGGGLVKAGGSLSCGVSNFRISAHTMNWVRRVPGGGLEWVASISTSSTYRDY-----ADAVKGRFTVSRDDLEDFVYLQMHKMRVEDTAIYYCARKGSDRLSDNDPFDAWG----PGTVVTVSPASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPSGALTSGVHTFPAVLQSSGLYSLSSVVTV---------PSSSLGT |
2 | 5gaoE | 0.12 | 0.12 | 4.38 | 1.33 | PROSPECTOR2 | | AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTKEAYKKLSQKFHGTKSNKK |
3 | 3dl8A | 0.09 | 0.09 | 3.43 | 0.99 | SPARKS-K | | DITYSTNNELGFDYLRDNMVLYKEQMVQRPLHFAVIDEVDSILIDEARTPLIISGQAAKSTKLEKDYTYDIKTKAVQLTEEGMTKAEKAFGIDNLFDVKHVVAMQKDVDYVVEDGQVVIVDSFTGR--LMKGRRYSEGLHQAIEAKEGLEIQNESMTLATITFQNYFRMTAKTEEEEFRNIYNMQVVTIPTNRPVVRDDRPDLIYRTME-GKFKAVAEDVAQRYMTGQPVLV |
4 | 5m32n | 0.11 | 0.09 | 3.29 | 0.49 | FFAS-3D | | -VVVHPLVLLSVVFNRIGKVGNQKRVVGVLSWQKKVLDVSNSFAVPFDE---------------DDKDDSVWFLDHDYLENMYGMFKKVNARERIVGWYHTGPKLHKNDIAINELMKRYCPNSVLHVTSEIGAEEAEEVGVEHLLRDIKDTTVGTIYQLQDVFNLLPDVSLQEFVKAFYLKTND---------------QMVVVYLASLIRSVVALHNLINNKIANR----- |
5 | 2rltA | 0.20 | 0.04 | 1.24 | 0.25 | HHpred | | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGSPGGLQKRHARV-----VKYDRRELQRRLDVEKWIDGRLEELYRGRE |
6 | 4k0mC | 0.17 | 0.13 | 4.40 | 0.93 | MUSTER | | ---------------------KVYTIDEAARTAKFDETVEVHAKLGSDQNVRGTVSLPHGGKQVRVLAIAKGEKIKEAEEAGADYVGGEEIIQAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA--------------------------- |
7 | 2rltA | 0.26 | 0.05 | 1.59 | 0.37 | HHsearch-2 | | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------GPGGS------------PGGLQKRHARV-----VKYDRRELQRRLDVEKWIDGRLEELYRGRE |
8 | 1pdiR | 0.11 | 0.09 | 3.44 | 1.10 | Neff-PPAS | | -------------LNGRGSTTSMRGVVKLTTTAGSQSGGDASSALAWNADVIHQRGGQTINGTLRINNTLTIASGGANITGTVNMTGGYIQGKRVVTQNEIDRPSRGSHLTNPNVNGNDQFGKPRLGVGCTGGEVQIQQMSYHKHAGGFGEHDDLGAFGNTRRSNFVGTRKGLDWDNRSYFTNDGYEIDPESQRNSKYTLNRPELIGISLNYIIKVKE-------------- |
9 | 3ikoF1 | 0.20 | 0.07 | 2.20 | 0.52 | HHsearch | | -----------------------------------------------------------------------------------------------------------------------------YQTERFTKFSDTLK-EFKIE--Q-----------NDPF-NIIRE--FRSAGQLALDLA--------NSGDE--SNVISSKDWLEARFWHLVELLLVFRNADLDIID- |
10 | 6d4hA | 0.11 | 0.11 | 4.03 | 0.62 | SP3 | | VLTTEALLQHLDSALQASRVHVYMYNRQWKLEYKSGELITETGYMDQIIEYLYPCLIITPLDCFWEGAKLQSGTAYLLGKPPLRWTNFDPLEFLEELKKINYQVDSWEEMLNKAEVGHGYMDRPCLNPADPDCPATAPNKNSTKPLDMALVLNGGCHGLSRKYMHWQKNSTGKLVSAHALQTMMTPKQMYEHFKGYEYVSHINWNEDKAAAILEAWQRTYVEVVHQSVAQNS |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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