Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | SQQPRPSVTWNLGSPSAYTAAAQVTTSSGTSPASAFFWRSRLGSHPEIHLGSQPKICFLRPRTARPPVLFSLMNSSEAAVKKFLPKSHLSRVIIRDNLSAQRIYEMEIRASDKTKKKMGHLYDHLKKKFMTDQLRKLGRWRRESMNIRQYLD |
1 | 5v3gD | 0.16 | 0.16 | 5.26 | 2.02 | MUSTER | | SEKPYVCRECGRGFSNKSHLLRHQRTHTGEKCGRGFRDKSHLLSHQRTHTGEKPYVCRECGRGFRDKSNLLSHQRTHTGEKPYVCRECGRGFSWQSVLRHQRTHTYVCRECGRGFRDKSNLLSHQRTHYVCRECGRGFRNKSHLLRHQRTHT |
2 | 5v3gD | 0.16 | 0.16 | 5.44 | 1.39 | Neff-PPAS | | SEKPYVCRECGRGFSNKSHLLRHQRTHTGEKCGRGFRDKSHLLSHQRTHTGEKPYVCRECGRGFRDKSNLLSHQRTHTGEKPYVCRECGRGFSWQSVLRHQRTHTGECRECGRGFRDKSNLLSHQRTHYVCRECGRGFRNKSHLLRHQRTHT |
3 | 5voxO | 0.12 | 0.11 | 3.96 | 0.88 | SPARKS-K | | VRSLHDIVKEDFVLNSEHLTTVLVAVPK-SLKSDFEKSYETLSKNVVPASASVIA-------EDAEYVLFNVHLFK-KNVQEFTTAAREKKFIPREFNYSEELIDQLKKEHDSAASLEQSLRVQLVRLAKTAYVDVFINWFHIKALRVYVES |
4 | 6exnt | 0.17 | 0.11 | 3.46 | 0.57 | FFAS-3D | | ---------------------------------------------------------MLCAKVPRRPVLSPKSRTEKSLLEQYVTNEPLSIEEIVPNLLTSLQNEWDAIMLEKLRSTLDSLTKKLSTVMYERDKLVAAQLLMEKNEDSKDL- |
5 | 2boaA1 | 0.19 | 0.10 | 3.19 | 0.28 | HHpred | | ------------------------------NVRNISKLS-QLVN------SNNLKLNFWSPSSFNRPVDVLVPSVSLQAFKSFLRSQGLEYAVTIEDL--QALLDNEDDEMQHNEGQER--------------------------------- |
6 | 2i13A | 0.13 | 0.12 | 4.11 | 1.84 | MUSTER | | -------------FSRSDHLAEHQRTHKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLAHQRTHTYKCPECGKSFSREDNLHTHQRTHTKCPECGKSFSRRDALNVHQRTH- |
7 | 5jtgA | 0.06 | 0.03 | 1.48 | 0.57 | CNFpred | | ------------------------------------------------------QVSLILT----KNCVLMFQE-FDPVRERIIRKKRADYLLY---SLIDALVDDYFVLLEKIDDEIDVLEEEVLERPEKETVQRTHQLKRNLVELRKTIW |
8 | 1vt4I | 0.13 | 0.12 | 4.10 | 0.54 | HHsearch-2 | | LEPAEYRKMFDRLSVFPPSAHI--PT----I-LLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIY-LELKVKSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIG-------HHLKNIEHPERMTLFRMLEQWNRLVNAILDFLP |
9 | 2i13A | 0.16 | 0.13 | 4.39 | 1.15 | Neff-PPAS | | THKPYKCPECGKSFSDKKDLTRHQRTHTGEKPGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNHTHQRTHTYKCPECGKSFSRRDALNVHQRTH------------------------ |
10 | 2boaA1 | 0.17 | 0.11 | 3.67 | 0.34 | HHsearch | | --------REKFFGDQVLRI----NVRN---GDEISKLS-QLVN------SNNLKLNFWSPSSFNRPVDVLVPSVSLQAFKSFLRSQGLEYAVTIEDL--QALLDNEDDEMQHNEGQE----------------RSSN-------N------ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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