Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | YSQMYSYSYNQYYQQYQNYYAQWGYDQNTGSYSYSYPQYGYTQSTMQTYEEVGDDALEDPMPQLDVTEANKEFMEQSEELYDALMDCHWQPLDTVSSEIP |
1 | 6d6vA1 | 0.10 | 0.09 | 3.31 | 0.84 | SPARKS-K | | ----------KYVSNLYEFLLATEKIVQTSELDTQFQEFLTTTIIASEQNLVENYKQKYNFSQLTIKQVIDDSIILSRNLLNIFEEDFKYFLIDFLVF-- |
2 | 6b1zA3 | 0.14 | 0.10 | 3.44 | 0.37 | FFAS-3D | | -AGYREEGY--LPEAFINMVAMLGW---------SPADNKEIVSMDEMIKEFDLNKVHKAGARFSAEKANQQYLQLMEAILPEFKK-------------- |
3 | 5yijA4 | 0.15 | 0.06 | 2.02 | 0.24 | HHpred | | -----------------------------------------------KIRMHV--G-TDKVDFSDVEKLEQQIQVIDTKLADAYLLEVTK---------- |
4 | 3hgfC | 0.12 | 0.10 | 3.52 | 0.93 | MUSTER | | -------------KKIENIVT--KIDKKKYIYKKLLNEIAEIEKDKTSLEEVKNINMSLNKLFLEIKKKSENMIKSMEKYIKDLDE---IKEQSPKAEMN |
5 | 3bm3A | 0.17 | 0.04 | 1.32 | 0.39 | CNFpred | | ---------------------------------------------------------------ITPSRIAKMLEEKAFEIYKEYEKQ------------- |
6 | 3e77A2 | 0.17 | 0.06 | 1.98 | 0.32 | HHsearch-2 | | ----------------------------------------------------------------GAAAMEKLSSIKSQTIYEIIDNSQFYVCPVPQSKIP |
7 | 3hgfA | 0.06 | 0.06 | 2.58 | 0.92 | Neff-PPAS | | ----MVKEIEKKIENIVTKIDKKKYIYDNMKKLLNEIAEIEKDKTSLEEVKNINMSYGKSLNKLFLEKIKKKSENMIKSMEKYIKDLDEIKEQSPKAEMN |
8 | 5i61B1 | 0.14 | 0.11 | 3.74 | 0.52 | HHsearch | | KVPKPTDVK-Q--RQDCTYLRRWDYRVDG--CVGVYST-------------RALGRL-AQERYYDPDVWGEKVTLR---YLSIIENVKYHPLKEEFKGI- |
9 | 2mcdA | 0.12 | 0.11 | 3.89 | 1.05 | SP3 | | ----MRGSHHHHHHGSVSF----GAPSPLSSESEDEINYMTPPEQEAQPGALAALHAEGPLAGVTRSDARVLIFNEWEERKKSEPWLRLMSDKAIFRRYP |
10 | 5tx1R | 0.08 | 0.08 | 3.16 | 0.51 | PROSPECTOR2 | | MNGTGGAFEGGLFSPYANSSTMTYATVGNSSLDSTAAAAAAAAAMTATRLASSYMPSSGSSPSVPSSIIAEEKLLALLAELEALSRQLSELREQQQQQNK |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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