>PF17621 (263 residues) MESRNSYENKIDEISSLSESKEHPIDIQEKKDAFVNEFKGVLFDKNTRSSELLFNFYECC YKFLPRAQPQDKIDSYNSALQAFSIFCSSTLTHNNIGFDFKLFPEVKLSGEHLETVFKYK NGDDVREIAKINITLQKEEGGLYNLRGLDFKGCFFSGQNFSNYDIQYVNWGTSLFDVDTP CIFNAPAYNKSNEKSLKPVSENGLSGVLTDRNNKIKLITGVAPFDDILFMDDDFDDSSSE DDPVENSPVVTSPVVSSSKSSFQ |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | | |||||||||||||
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Seq | MESRNSYENKIDEISSLSESKEHPIDIQEKKDAFVNEFKGVLFDKNTRSSELLFNFYECCYKFLPRAQPQDKIDSYNSALQAFSIFCSSTLTHNNIGFDFKLFPEVKLSGEHLETVFKYKNGDDVREIAKINITLQKEEGGLYNLRGLDFKGCFFSGQNFSNYDIQYVNWGTSLFDVDTPCIFNAPAYNKSNEKSLKPVSENGLSGVLTDRNNKIKLITGVAPFDDILFMDDDFDDSSSEDDPVENSPVVTSPVVSSSKSSFQ | |||||||||||||||||||
1 | 4pc4A | 0.14 | 0.11 | 3.92 | 0.70 | SPARKS-K | SILTGDYDSAVRQSLEYESQGKGS-IIQNVVNNLIID---------KRR-----NTMEYCYKLWV-GNGQEIVRKYFP--LNFRLIMAGNIIYRNYNLALKLGSTT--NPSNERIAYGDGVDKHTELVSWKFITLWENNRVYFKIHNTKYNQYLKMSTTTCNCN-----------SRDRVVYGGNSADSTREQWFFQPAKYEN---------DVLFFIYNR-QFNDALELGTIVNASGDRKAVGHDGEVAGLPDIYSWFITPF | |||||||||||||
2 | 1nlxN | 0.15 | 0.05 | 1.79 | 0.57 | FFAS-3D | --EEQKLIEDVNASFRAAMATTANVPPADKYKTFEAAFTVSSVSKAPQLVPKLDEVYNAAYNAADHAAPEDKYEAFVLHFEALRIIAGTPEVHA------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
3 | 4rglA | 0.19 | 0.11 | 3.57 | 0.32 | HHpred | ----ADLLDWLEN------TNEHPL---VASCIFHYEFEFIFADGNGR-GRLWQTLILRNWKPLLAYLPRDRQEDYYRVLAVADS-------QAD----ATPFVEF-LGRDAVREAV-----------STDH-QVTDQVAALIR--------A-IGGGELSSNDLQ---------------ALGLSHRPTFRNNYLNPA-EDEWIERTQDPTQRYRLTG-------------------------------------------- | |||||||||||||
4 | 3du1X | 0.17 | 0.14 | 4.51 | 0.57 | MUSTER | MNVGEILRHYAAGKRNFQH-----INLQEIE--LTNSLTGADLSYDLRQTRL--NFSHTC---LREAD--------------LSILWGIDLSEYRAILDLTKLVKTRLEEANLKASLCGANLNSAN--CLLQADLRPSSNQRTDLGYVLLTGADLSYADLRAASLHHANLGAKL----CRANFGRTIQWGNLAADLSGAS---LQGALSY------NLES-AILRKANLQGADLTGAILKDAELKGAIMPDGSIH-------- | |||||||||||||
5 | 3qwvA | 0.06 | 0.02 | 0.82 | 0.53 | CNFpred | VRYARNVIEEFRRAKHYK----SPSELLEICELSQEKMSSVFEDS----NVYMLHMMYQAMGVCLYMDWEGALKYGQKIIKPYSKHYP------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
6 | 2pffB | 0.20 | 0.19 | 6.18 | 0.90 | HHsearch-2 | GSLEHVIASQLQENKILPEPTEGPTTPAELVGKFLYVSSLVEPSKVGQFDQVCLTEFENCYLEGNDAQENTTLVKTK---ELIKNYITARIMAFDKKSNSALFRAVGEGNAQLVAIFGQGNTDDYFEELRDLYKFSAETLSELIRTTLDAEKVFTQGLNILEWQVDYVNKTNSHLPAGKQVEISNGAKNL--VVSGPPQSLYGLNLTLRKAKAPSGLDQSR-----IPFSERKFSNR----FLPVASPFHSHLLVPASNVSFN | |||||||||||||
7 | 4pc4A | 0.14 | 0.11 | 3.90 | 0.68 | Neff-PPAS | ----GDYDSAVRQSLEYESQGKGSI-IQNVVNNLIIDKR--------------RNTMEYCYKLW-VGNGQEIVRKYFP--LNFRLIMANYVKIIYRNYNLALKLGSTTNPSNERIAYGDGVDKHTELVSWKFITLWENNRVYFKIHNTKYNQYLKMSTTTCNCN-----------SRDRVVYGGNSADSTREQWFFQPAKYE---------NDVLFFIYNRQ-FNDALELGTIVNASGDHDGEVAGLPDIYSWFITPF----- | |||||||||||||
8 | 2xt2A1 | 0.15 | 0.04 | 1.41 | 0.32 | HHsearch | --------------------------------------------------------------------------------------------------------AKTLESKDY-----------------CGESFVSEDRSGQSLESIRFEDCTFRQCNFTEAELNRCKFRECEFV---DCNLSLISIPQ-----------TSFMEVR------------------------------------------------------- | |||||||||||||
9 | 3du1X | 0.16 | 0.14 | 4.54 | 0.79 | SP3 | MNVGEILRHYAAGKRNFQHINLQEIELTNAS------LTGADLS-YADLRQTRLNFSHTC---LREADLSEGIDLSEADLYR-AILREADLTGAKLKTRLENLIKASLCGANL-------NSANLSRCLLFQADLRPSSNQRTDLGYVLLTGADLSYADLRAASLH----HANLDGAKCRANFGRTIQWGNLAADLSGASLQGLSYALESAIRKANL-QG-ADLTGAILKDAELKGAIMPDGSIH------------------ | |||||||||||||
10 | 1jmma | 0.14 | 0.13 | 4.56 | 0.96 | PROSPECTOR2 | QKDLADYPVKLKAYED----------EQASIKAALAELENLVYDLEPNKASAVDDAFSKSTSKAKYVQKILQLDDLDITNLEQSNDVASSELYGNFGDKAGWSTTVSNNSQVKWGSVLLERGQSAKKISKIVYKYTVDPKSKFQGQKVWLLGVFASAYTGQDYSGKFVKISGSSIGEKNGIYATDTLNFKQGEGGSRWTYKNSQAGSGWDSSPNNHVTVGATSATNVPVSDPVVPGKDNTDGKKPKIRAVNVPKVTKEKTPPV | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |