Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | ATEETREPTYFTCGCVIQNHVLKGAVKLYGQFPSPKTLRASAWLHDGENHERHRQPILVEGTATATEALYILLPTELSSPEGNRPRNYSATLTLASRDCYERFVCPVYDSGTPMGVLMNLTYLWYLGDYGAILKIYFGLFCGACVITRSLLLICGYYPPRE |
1 | 2ldkA | 0.06 | 0.06 | 2.44 | 0.71 | SPARKS-K | | SVDKDVEALSFSIVAEFDWGPPTWPATFETHEFTVGG--KAAYYMTGPDGTKARGWWQFTTIEAPDHLEFDDGFADEHGAPVDELGVTHATVKLEPLENRTRMTIISTFES--EEQMQKMAEMGMEEGMREAIEQIDAVLSEPANALEHHHHHH------- |
2 | 3chnA4 | 0.19 | 0.10 | 3.21 | 0.41 | FFAS-3D | | ---ALNELVTLTC-------------LARGFSPKDVLV---RWLQGSQE---------------LPREKYLTWASRQEPSQGTTTFAVTSILRVAAEDKGDTFSCMVGHEALPLAFTQK------------------------------------------ |
3 | 2f1lA | 0.14 | 0.10 | 3.39 | 0.31 | HHpred | | --------DLVVIGKIVSVYGIRGEVKVYSFTDPLDNLLDYRRWTLRRD--GEIRQAELVRGRLHG-------KVLAAKLKGLDDRGYEICIPRSELPSYQLEGLKVIDGRQLLGVIDHLLET-GANDVV-VK---------------------------- |
4 | 1ticB2 | 0.12 | 0.10 | 3.48 | 0.61 | MUSTER | | --RSVVPGNKWDCVC---QKWVPDG-KIITTFTSLLSTNGVLRSD--KQKT-----LVFRGTNSFRSAITDIVFNFSDYKPVKGAKVHAGFLSSYEQ---------VVN--DYFPVVQEQLTA-H-PTY----KVIVG---GGAQLAGMDLYQREPRLSPK |
5 | 3rkoC | 0.16 | 0.04 | 1.45 | 0.59 | CNFpred | | ----------------------------------------------------------------------------------------------------------------PTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGV----- |
6 | 2qggA1 | 0.12 | 0.06 | 2.20 | 0.38 | HHsearch-2 | | ----NVPEDRIQIGQLRSAYGLNGWLWVYSNTEPS-NFDYLPWYI-ETK--AGWQTVDVKRWKPH-------GKGLVVSLKGVSDRASNIWIAKSQLPK-------------------------------------------------------------- |
7 | 2vbeA4 | 0.12 | 0.11 | 3.91 | 0.60 | Neff-PPAS | | --HEQLDLDYCGSTGVVIENVNGGFSFSNSWIAA-----------DADGT---EQFTGIYFRTPTSTQSHKIVSGVHINTANKNTAANNQSIAIE-QSAIFVFVSGCTLTGDEWAVNIVDINECVSFDKCIFNKPLRYLRSGGVSVTDCYLAGITEVQKPE |
8 | 3akjA2 | 0.13 | 0.11 | 3.63 | 0.42 | HHsearch | | ---FTT-----------HQYELVDFLSLKNTMIELE-KS--------------GKDTNLNDVLYAIDNQHF-IEPVADTLLGNFDRNWGFLRASN---SKEYQIAPIFDCGSCLYPQADDVVCQVLSNIDELNA-RIYNPQSILKINYALLRIYRIDMNK- |
9 | 1ticB2 | 0.11 | 0.09 | 3.34 | 0.56 | SP3 | | --RSVVPGNKWDCVQCQK--WVPDG-KIITTFTSLLSDTNGYVLRSDKQKTIY---LVFRGTNSFRSAITDIVFNFSDYKPVKGAKVHAGFLSSYEQ---------VVND--YFPVVQEQLTA--HPTY----KVIV---TGGAQALLAGMDLYQREPRLS |
10 | 3nuzA2 | 0.11 | 0.11 | 3.81 | 0.56 | PROSPECTOR2 | | KFPQSPAPV------CIKREQREGYRLEKWEFYPLPKCVSTFLVLIPDNINKPVPAILCIPGSGGNKEGLAGEPGIAPKLNDRYKDPKLIAVAVDNPAAGEASDLERYTLGSNYDYDVVSRYLLELGWSYLGYASYLDQVLNWKTQKHEPVLGTLDTSIYA |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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