Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | QTTLPSTVNSTATGVTSDSQQNTTQLPASSAAALSLPSASAVQAHSPSSFSDTYPTATALCGTLVVVGIVLCLSLASTVRSKELPSDHEPLEAWEQGSDVEAPPLPEKSPCPEHVPEIRVEIPRYV |
1 | 5yfpE7 | 0.06 | 0.05 | 2.08 | 0.88 | SPARKS-K | | YNDFYSMGKSDIEQLRLSKNWKLNLKSVKLMKNLLILSSKLETSSIPKTINTKLVIEKYSEMMENELLENFNSEIAIILN--NFNGGVNVIQSF-----INQHDYFI------------------- |
2 | 1jswB | 0.19 | 0.15 | 4.86 | 0.43 | FFAS-3D | | -------LGATAIGTGLNTPKEYSPLAKKLAEVTGFPCVPAEDLIEATSDCGAYVMVHGALKRLAVKMSKICNDLRLLSSGPRAGLNEINLPELQAGSSI----MPAKNP---------------- |
3 | 1jvrA | 0.17 | 0.16 | 5.24 | 0.84 | MUSTER | | PTPIPKAPRGLSTHHWLNFLQAAYRLQPSDFDFQQLRRFLKLALKTPILNPIDYSLLASLIGYPGRVVEIINILVKNQVSPSAPAAPVPTPICPTTTPPPPPPPSPEAHVPPPYVE------PTTT |
4 | 4u8yA | 0.21 | 0.05 | 1.52 | 0.51 | CNFpred | | ----------------------------------------------------TMFGMVLAIGLLVDNAIVVVENVERVMAE--------------------------------------------- |
5 | 2pffB | 0.21 | 0.19 | 6.05 | 0.70 | HHsearch-2 | | EKIFKEINEHSTSYLLSATQPALTLMEKAAFEDLSKIPADATFAGH--SLGE----YAALASLADVMSI-ESLVEVVFYRTMQVAVPRDELGRSGRVFSQEALQ---YVV--ERVGKWLVEIVNYN |
6 | 4gwpD | 0.12 | 0.11 | 3.92 | 0.71 | Neff-PPAS | | -QALYEKLEQTRTIL-SVKLAELINMTTIADRN-DDDEGSFAQENSELAVATTSVMMVNNQTMQLIKNVQDLLILTRSIKEKWLLNQIPVTEHSKV-------TRFDEKQIEELLDNCIETFVAEK |
7 | 2l9uA | 0.16 | 0.05 | 1.58 | 0.51 | HHsearch | | ----------------------------------------------------MGRTHLTMALTVIAGLVVIFMMLGGTFLYRRHHHHHH------------------------------------- |
8 | 5y6pC1 | 0.12 | 0.12 | 4.21 | 0.51 | SP3 | | RHYVPRPVETYEDRGFATILPRTWEGETNTIGAGDIEPVTKEEVEESRKVPVDAASTGAFVEYARMMKEERAQALADQARRNSAPTSGRPTCGETEGTEFVSNARPDGVKVVEYWGVPNGPVPRLF |
9 | 1jvr | 0.12 | 0.11 | 3.94 | 0.67 | PROSPECTOR2 | | HMGQIHGLSPTPIPKAPRG-------LSTHHWLNFLQAAYRLQPGPSDFDFQQLRRFLKLADYSLLASLIVVEIINILVKNQVSPSAPAAPVPTPICPTTTPPPPPPPSPEAHVPPPVEPTTTQCF |
10 | 3gm0A1 | 0.22 | 0.17 | 5.49 | 0.46 | FFAS03 | | --TLSLTCSVTGDSVTSGYWSWIRQFPGNKLDYMGYISYRGSTYYNPSLKSRISITRDTSKNQVYLQLKSVSSEDTATYYCSYFDSDDYAMEYWGQGTSV-------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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