Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | MNIIINTLGLNIFIKTVYNFSDHTMERYHPYQRAPWSASIFKKNYNNVKVASYVEIPYTTNNADVEITYTTNAPSRPESKARRRLDFTNMTPLPCSIDDGSFAKPLM |
1 | 3ub1A1 | 0.11 | 0.10 | 3.72 | 0.74 | SPARKS-K | | SLETQAFSFAEEFAWDYFSRYQDFVRRITKY----TTEQLANENNGTYSDVIYTSAFKYSENQKARVRVYTPKAGQEQDQL--QYDTNLVDYYPIVFDKDNAVDALP |
2 | 3pcrA | 0.22 | 0.18 | 5.62 | 0.29 | FFAS-3D | | ----FNVPALTLTHERISKASEYNAERSLDTPNACINISISQSSDGNIYVTSHTGVL-------------IAPEDRPNEGLTNRTSYEVPQGVKCIIDEVSALQP-- |
3 | 3u1wA | 0.13 | 0.07 | 2.27 | 0.26 | HHpred | | ----------------------------------PPVENAFQEKYPDAKNPVYYVVDFNNGGSETTAWFTDQGIW-EK----IDISFAQLPAA-------------- |
4 | 3k63A | 0.15 | 0.14 | 4.75 | 0.64 | MUSTER | | FKKIVNNIRLKTFDFKLAAFPNQNYDQLLPIYKNYYQGIEQQHKYQNELDIKIINFLYPDGDFGLKLSLLTDKKNNQVYY--KLLEVSGFKSNPYGVDNGT--IPGL |
5 | 4p1yA | 0.15 | 0.08 | 2.85 | 0.57 | CNFpred | | --KSKITVTYQREMDLYQICW----------NGFYWAGANYKN-FKTRTFKSTYEIDWE--NHKVKLLDTKETENNK------------------------------ |
6 | 6bliC | 0.17 | 0.04 | 1.22 | 0.43 | HHsearch-2 | | ------------------------------------------------------------------------------------NNDFHFNFVPCSICSNNPTCWAI |
7 | 3k63A | 0.15 | 0.14 | 4.74 | 0.70 | Neff-PPAS | | --IVNNIRLKDTFDFKLAAFPNQNYDQLLPYKNYYQGIEIQQHKYQNELDIKIINFLYPDGNGTLKLSLLTDKKNNQVYYKLLEVSGFKSNPYG---VDENGTIPGL |
8 | 3u1wA1 | 0.10 | 0.05 | 1.71 | 0.26 | HHsearch | | -----------------------------QGIIPLPVENAFQEKYPDAKNPVFYVVDFNNGGSETTAWFTDQGI---------------------------WEK--- |
9 | 4jn6B1 | 0.10 | 0.10 | 3.77 | 0.53 | SP3 | | AKVAIVGSGSTDLLYKLLRSEWLEPRWMVGIDPESDGLARAAKLGLETTHEGVDWLLAQPDKPDLVFEATSAYVHRDAPKYAEAIDLTPAAVGPAVIPPANLRE-HL |
10 | 3zxaC2 | 0.03 | 0.03 | 1.67 | 0.49 | PROSPECTOR2 | | SAQIGDFAG---------VKDGPRLVSWSKTKGTAGWEHDCHFLGTGNFSLTLFYEKAPVSGLENADASDFSVLGEAAAGSVQWAGVKVAERGQGVKMVTTEEQPKG |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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