Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | MDSSNCIKIDVKYDMPLHYQCHNNADKDIVNAYDTIDVDPNKKFIINHNHEQHQVNETNKLVDKTFINDTATYNSCIIKI |
1 | 2jkbA2 | 0.07 | 0.07 | 3.02 | 0.71 | SPARKS-K | | INGHYYLKLKKDFRYTVRYNETTNKPTNYTINDKYEVLEGGKSLTVEQYSVDFDSGSLRERHNGKQVPMNVFYKDSLFKV |
2 | 2leqA | 0.10 | 0.10 | 3.70 | 0.33 | FFAS-3D | | MEIKLIAQVKTVINAPIEKVWEALVNPEIIKEYTILQFNERSILQYSHFSPLTGKPDLPENYHVVTITLTALKKGVEVEL |
3 | 5a1wH2 | 0.27 | 0.21 | 6.54 | 0.28 | HHpred | | -DKFGRIRLHVENKKGVQLQTHPNVDKKLFTAESLIGLNPEKSFPVNSDVLQTTEES---FSKKNYCN------------ |
4 | 6govY | 0.13 | 0.12 | 4.35 | 0.69 | MUSTER | | IDEFG--RTKESYKVPYGAVLAKGDGEQVAGGETVANWDPHTMPVITEVSGFVRFTDMIDGQTITRQTDELTGLSSLVVL |
5 | 3e38A | 0.11 | 0.10 | 3.58 | 0.71 | CNFpred | | SRNEQGVTLSITNVTDLVLKLKKTAHDTLLVYFRDMTLKPHTRYTVRIGFKQ-----GIKGGDVNFE-----VTNFIVAP |
6 | 5g0zA | 0.26 | 0.24 | 7.33 | 0.49 | HHsearch-2 | | MHPNRCYKFTMQYALGAHPDY---VAHDVIRQQDPYYVGPNNIERINLTCLQSVYNDNFE----RFFDDVLIEVSLLFKI |
7 | 2v6lZ | 0.08 | 0.07 | 3.00 | 0.77 | Neff-PPAS | | --TVPNDDWTLSSLSETFDDGTQTLQGELTLALDKLAKNPNPQLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNF |
8 | 6nbqM | 0.18 | 0.15 | 4.90 | 0.78 | HHsearch | | KSTTRHVHI-----------YAGHVVGEVHTETLTLNVDPDNELEWNEAALAKVEAKFRELVANAAGEDLTEYNLRRIG- |
9 | 2idcA | 0.15 | 0.15 | 5.05 | 0.55 | SP3 | | LNNTDPYEFEITFECLESLKHDSSRSLDHDQELDSILVGPVPKFVFSADPPSAELIPASELVSVTVILLSCSYDGEFVRV |
10 | 4aq1A6 | 0.08 | 0.07 | 2.99 | 0.42 | PROSPECTOR2 | | KADATPVGLDIVAPSEIDVNAPNTASTA---DVDFINFESVEIYTLDSNGNRLKKVTPTATTLVGTNDYVEVNGNVLQFA |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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