Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40
| | |
| Seq | MNRSGKHLISSIILYPRPSGECISSISLDKQTQATTSPLYFCWR |
1 | 4neiA3 | 0.05 | 0.05 | 2.23 | 0.80 | SPARKS-K | | SVKHVSENGKDVVVVDLKDGSNVVVALSYNANSEQVKVNAIEWK |
2 | 4r8oA | 0.05 | 0.05 | 2.18 | 0.26 | FFAS-3D | | -DANNQRTEDEAQKWNSNKNRWENNLCIRYTYGNKSTTEYYKW- |
3 | 2z4dA | 0.21 | 0.18 | 5.77 | 0.22 | HHpred | | --RAGVCEYNERLCTPIPVQGEIEIKPNE----EEEGFWDFEWR |
4 | 6f1te | 0.14 | 0.14 | 4.64 | 0.75 | MUSTER | | LSDPQVHTV--LVERSTLKEFISYNINIDIHYGVKSNSLAFIKR |
5 | 3fssA | 0.11 | 0.09 | 3.27 | 0.55 | CNFpred | | --------IKMASFLPVPEKLIYLFMTYTSCENKFSEPVVMTLN |
6 | 2kr0A | 0.24 | 0.20 | 6.39 | 0.52 | HHsearch-2 | | SLVSNKYLVKGTTVTPDKRKGLVYIQQTD------DSLIHFCWK |
7 | 1qypA | 0.16 | 0.16 | 5.30 | 0.90 | Neff-PPAS | | MEQDLKTLPTTKITCPKCGNDTAYWWEMQRAGDEPSTIFYKCTK |
8 | 2kr0A | 0.24 | 0.20 | 6.36 | 0.72 | HHsearch | | SLRAGKMSLKGTTVTPDKRKGLVYIQQTD------DSLIHFCW- |
9 | 3jcrD5 | 0.12 | 0.09 | 3.18 | 0.88 | SP3 | | FNDTSDQIISGIKVWDLRQNKLTYTMRGHADS------------ |
10 | 1uok1 | 0.07 | 0.07 | 2.84 | 0.33 | PROSPECTOR2 | | ILENNPSIFCIFELPEDISYSEVELLIHNYDVENGPIEMVFKLK |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|