Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | NQREKTIGFAYVLLLFLAVSICCCMIIFWTNSDFDTTRQKDMVLVKVEKIRKFQELQKENKPIVDSLYNRISKLTPGINAQYEEEDIKYLLNDLKNTYQNNGWDNRYKVFMHVADFYQMWLTDRKELWSKRENISTFKKNLEECEIG |
1 | 5cwjA | 0.08 | 0.08 | 3.18 | 0.77 | SPARKS-K | | EEQERIRRILKEARKSEESLRQAIEDVAQLAKKSQDSEVLEEAIRVILRIAKESGSEEALRQAIRAVAEIAKEAQ---DSEVLEEAIRVILRIAKESGSEEALRQAIRAVAEIAKELEEAIRVIRQIAEESEARRQAERAEEEIRRR |
2 | 5xuaA | 0.07 | 0.07 | 2.76 | 1.05 | FFAS-3D | | QEPLTKERLISDWNSNVSVAVARTTAIAKSSDASLVQFLAADAAATTKSTANVLKQIEPLQPAEREILDKIMQ---------VRKTYIASRDKVSQLKADGMAEEAESTLINYVPAAQGYLKLLGELLNLQRALDAKAAEVEQIE-- |
3 | 6ftj1 | 0.07 | 0.06 | 2.48 | 0.26 | HHpred | | -------PLLVVAAFYIL-FFTVIIYVR-LDFSITKDPAAEAR-MKVAITEQVLTLVNKRIGLYRHFDETINRYKQSRDSTLEHKALTSEIASLQSRLKTEGS----DLCDK----VSEMQKLDAQVKELVLK---SAVEAER---- |
4 | 2x0lA | 0.14 | 0.14 | 4.65 | 0.77 | MUSTER | | PKEKDEMVEQEFNRLLEATSYLSHQLDFNVLNNKPVSLGQALEVVIQLQEKHVKDEQIEHWKKIVKTQEELKELLNK--MVNLKEKIKELHQQYKEASEVKPPRD-ITAEFLVKSKHRDLTALCKEYDELAETQGKLEEKLQELEAN |
5 | 3v0aB | 0.07 | 0.06 | 2.49 | 0.69 | CNFpred | | NIYSKNTAYFKKIYYNFLDQWWTQYYSQYFD-------------LICMAKRSVLAQETLIKRIIQKKLSYLIGN---NISSDNLALMNLTTTNTLRDIS--------NESQIAMNNVDSFLNNAAICVFESNIYPKFISFMEQCINN |
6 | 1vt4I3 | 0.11 | 0.10 | 3.65 | 0.62 | HHsearch-2 | | ----------EYALHRSI-VDHYNIPKT-FDSDIPPYLDQYFYSHHLKNIEHPER-MTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKP--YICDNDPKYERLVNAILDFLPKIEEIALMAEDEAIFEEAHKQVQRG |
7 | 5t4oI | 0.05 | 0.05 | 2.46 | 0.83 | Neff-PPAS | | NLNATILGQAIAFVLFVLFAMKYVWPPLMAAIEKRQKEIADGLASAERAHKDLDLAKASATDQLKKAKAEAQVII-EQANKRRSQILDEAKAEAEQERTKIVAQAQAEIEAERKRAREELRKQVAILAVAGAEKIIERSVDEAANSD |
8 | 3jc8Oa | 0.12 | 0.12 | 4.10 | 0.57 | HHsearch | | DQFVKAPPAIKF-GGLAFVVGALTAANF-FMVIQPTEEIGWAV-AERRKLDLELADKSEIAQNLNERRREMDVLEPQRDIEELLAQINDIGKKSGLEVTPGKESEFSGNYHEIALFLQEMANMRRIVNNIKSAKLKNEKVVLQSEF- |
9 | 3cqiA | 0.06 | 0.06 | 2.65 | 0.68 | SP3 | | DDAVRAQGLEIMRKAIQFAQDVIQLAGYDVYYQEANNETRRRFRDGLKESVEMASRAYPLMNSISKALGYAHYLNNPWNLSAWDNDVQMELQAGIGHIVKDTKPGVFKNFERCFETLKQSETAEDPAAEVAKARDWVKARMAKAGM- |
10 | 5cwmA | 0.08 | 0.08 | 3.20 | 0.76 | PROSPECTOR2 | | DPEDELKRVPEVALRAVELVVRVAELLLRIAKESGSEEALERALRVAEEAARLAKRLRAVELVVRVAELLLRIAKESGSEEALEREAARLAKRVLELAEKQGDPEVARRAVELVKRVAELLEAKERAERVREEARELQERVKELRER |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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