Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60
| | | |
| Seq | QQCGDETCGAGTCCAVFSQNHCRRLSQMYDLCSDHADASPSGNYLFFCPCEPGLHCDRNTWTCTEGSS |
1 | 1imtA | 0.29 | 0.28 | 8.51 | 3.29 | SPARKS-K | | GACERLQCGKGTCCAVKSVRVCTPVGTSGEDCHPASHPFSGQRMHHTCPCAPNLACVPKKFKCLSK-- |
2 | 2jtkA | 0.20 | 0.19 | 6.12 | 0.77 | FFAS-3D | | PCLRSSDCIDGFCCARHWTKICKPVLHQGEVCTKQRKKGSGLEIFQRCDCAKGLSCKVWKHVCQK--- |
3 | 1pcnA | 0.29 | 0.26 | 8.07 | 1.13 | HHpred | | ELCLSAQCKSN-CCQHDSLSRCALKARENSECSAFTL---YGVY-YKCPCERGLTCEGDKGICHNVGR |
4 | 2n8kA | 0.29 | 0.28 | 8.50 | 2.89 | MUSTER | | VTCGGKQCKPNSCCVQNDSPRCHPLGKLNNPCEVEPNE--NGIYSQHCPCGEGLSCTKVGERCQEES- |
5 | 2n8kA | 0.31 | 0.29 | 8.90 | 2.65 | CNFpred | | VTCGGKQCKPNSCCVQNSSPRCHPLGKLNNPCEVEPNE--NGIYSQHCPCGEGLSCTKVKLRCQEES- |
6 | 2jtkA | 0.21 | 0.21 | 6.53 | 2.25 | HHsearch-2 | | DPCLSSDCIDGFCCARHWTKICKPVLHQGEVCTKQRKKGHGLEIFQRCDCAKGLSCKVWKHVCQKI-- |
7 | 2n8kA | 0.32 | 0.31 | 9.29 | 3.00 | Neff-PPAS | | VTCGGKQCKPNSCCVQNSSPRCHPLGKLNNPCEVEPNE--NGIYSQHCPCGEGLSCTKNKLRCQEES- |
8 | 1imtA | 0.30 | 0.29 | 8.91 | 2.82 | HHsearch | | GACEDLQCGKGTCCAVSSVRVCTPVGTSGEDCHPASHKISGQRMHHTCPCAPNLACVQTSPKCLSK-- |
9 | 2n8kA | 0.29 | 0.28 | 8.50 | 0.82 | PROSPECTOR2 | | VTCGGKQCKPNSCCVQNDSPRCHPLGKLNNPCEVEPNE--NGIYSQHCPCGEGLSCTKVGERCQEE-S |
10 | 2jtkA | 0.23 | 0.19 | 6.00 | 0.66 | SAM | | -PCLSSDCIDGFCCARHWTKICKPVLHQGEVCTKQRKKGHGLEIFQRCDCAKGLSCKV---------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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