Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | MSDRISAVLMVPRDDALPMDVQAVNHRREVINLMKEIGEIDENSVRYKNATDQATISLGDNMMTCWQHNLIAVLYYADGKANKEIGGPIIHQDYTNRRHSCVRVERN |
1 | 5bq9A1 | 0.09 | 0.08 | 3.22 | 0.68 | SPARKS-K | | --QGVTKIIWVSNNGKPNLKIEFEEEKSNFFKEVKKKASGSGNSLLIEASNYPCYISPGGKLAINFGKVELSHFILPKVGVKTEHA---EIFKDHNTIFFHSELTFI |
2 | 2kxoA | 0.11 | 0.06 | 2.05 | 0.47 | FFAS-3D | | -RDRLQIIIAQERAQEGQTPDYLPTLRKALMEVLSKYVNVSLDNIRISQEKQDGMDVL------------------------------------------------- |
3 | 5jpqj2 | 0.18 | 0.12 | 3.94 | 0.34 | HHpred | | -GARIVRIATNP-------DYMSMGYGSKALQLLVDY--------------DYVGVSYGLQLHKFWKRAQFVPVYLR------------QTANDLTGEHTCVMIR-- |
4 | 1n9lA | 0.13 | 0.12 | 4.22 | 0.66 | MUSTER | | LRH--TFVVADATLPDCP--LVYAS--EGFYAMTGGPDEVLGHNCRQGEGTDPKEVQKIRDAIKKGEACSVRLLNYKDGTPFWNLLTVTPIKTPDGRVSKFVGVQVD |
5 | 4biuA | 0.11 | 0.08 | 3.01 | 0.57 | CNFpred | | --------------------IKANQLWSEVLDNAAFEAEQMGKSLTVNFPPGPWPLYGNPNALESALENIVRNALRYS--------TKIEVGFAVDKDGITITVDDD |
6 | 2zpaB | 0.16 | 0.11 | 3.73 | 0.34 | HHsearch-2 | | RGRRVSRIAVHP-------ARQREGTGRQLIAGAL-QY---------TQDLDYLSVSFGYELWRFWQRCGFVLVR-------------GNHREASSGCYTA--ALLP |
7 | 5bq9A1 | 0.06 | 0.06 | 2.50 | 0.69 | Neff-PPAS | | --QGVTKIIWVSNNGKLKIEFVSEEEKSNFFKEVKKKASELGLNFPLVQGSGNSLLIEAGKLAINFGKVELSHFILPKAEIFKDHNTIFFHKHKLPGVNSELTFIPT |
8 | 3nqkA2 | 0.15 | 0.12 | 4.11 | 0.58 | HHsearch | | YSGTASSKVYTYINDTNART---TDK--------RTGYVVDNNSIFFYAGLNEDNVHFKEGTLDKQDDP-SNEEFELIGTPTYSS----TSVDATRRRYVQI-FER- |
9 | 3qmqC | 0.04 | 0.04 | 1.91 | 0.62 | SP3 | | MGSMHVTLVEINVHED-----KVDEFIEVFRQNHLGSVQEEGNRFDVLQDPEVNSRFY---IYEAYEDAVAFHKTTPHYKTCVAKLESLMTGPRKKRLFNGLMP--- |
10 | 5j6qA1 | 0.05 | 0.05 | 2.12 | 0.47 | PROSPECTOR2 | | VDKNYTVS----AKDS-----------AKLIEEVRKALEVKFEDTKAGANVNDRVYDIKVDNVNLTNATQLQNKINSLTEGQSQVLGGKVVDYDIDSKELHTVTVKN |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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