Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | MRELNEHEIKCAAGGQDYGREIAQGAGAAAGTFVAGGGGAIVGPIVAGMVYDWASNKTPDSALSPSGLGSTLKKKPEGLPSEAWNYAEGRMCNWSPNNLNDVC |
1 | 3boiA | 0.17 | 0.13 | 4.15 | 1.16 | SPARKS-K | | KGADGAHGVNGCPGTAGAA-------GSVGGPGCDGGHGGNGGNCAGGVGGAGGASGGTGVGGR-GGKGGSGTPKGADGAPGAP------------------- |
2 | 1ldjA3 | 0.18 | 0.16 | 5.05 | 0.46 | FFAS-3D | | SDDAEASMISKLK--QACGFEYTSKLQRMFQ-------DIGVSKDLNEQFKKHLTNSEPLDLVLSSGSWPFQQSCTFALPSELERSYSGRKLTWLYQ------ |
3 | 6f72A | 0.17 | 0.12 | 3.83 | 0.36 | HHpred | | -----------------EMAARDRYAAAAGSVYLNEAHLNWKESFYG-DNYARLL--RVKKKYDPDS----VFYVKTGVGSEVWDVDTGRLCRA--------- |
4 | 5yfpC | 0.10 | 0.10 | 3.62 | 0.85 | MUSTER | | LDGLTYDIVEMARAEQILAIRLFKIYDLEEREDLRIEAIRNIIKKKEIEIEKSSIKKLPNSKNTARLQDETPKVIPTNKGLYQEIMSGTISTRTAPRGYKHFL |
5 | 5gpjA | 0.20 | 0.09 | 2.80 | 0.67 | CNFpred | | ------NLFKIYYG-----DDWGGLFEAITGYGLGGSSMALFGRVGGGIYTKAADV----------------------------------------------- |
6 | 1ry3A | 0.24 | 0.11 | 3.33 | 0.59 | HHsearch-2 | | VKELNVKEMKQLHGGVNNWGQAFQERYTGINSFVSGVASGAGSIG----------R----------------------------------------------- |
7 | 4luqA1 | 0.14 | 0.14 | 4.65 | 0.91 | Neff-PPAS | | --QVTRQEARRVIAAIRNDNVPDATIAALDKSGSLIKLFQRVGELARSLIASIAGRTTMQRYQARNALIRSLINNPLGTQTDNWIYFPTITFFDICADLADAA |
8 | 1ry3A | 0.24 | 0.11 | 3.33 | 0.61 | HHsearch | | VKELNVKEMKQLHGGVNNWGQAFQERYTGINSFVSGVASGAGSIG----------R----------------------------------------------- |
9 | 6g7dA1 | 0.09 | 0.09 | 3.36 | 0.62 | SP3 | | IRDTDALFALADRVTGFMPADEGRTLYETAVRYLGDGIGTYCGKSTVLLGAAARQTGGVHHHGSEEHQPGWEYHDPSLVDPVTGLFDTLPRLTLDEADLYDHV |
10 | 1jvr | 0.06 | 0.06 | 2.57 | 0.56 | PROSPECTOR2 | | PRGLSTHHWLNFGPSDFDFQQLRRFLKLALKTPIWLNPIDYSLLASVVEIINILVKNQVSPSAPAAPVPTPICPTTTPPPPPPPSPEAHVPPPYVEPTTTQCF |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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