Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | QLNDAKQTRANPGTSRPRKNRGRSSQGYEVPGRTCERASGPRQSARLSKQDGRDSKSNGNVTIGKTKCSELPRGKSPRGGKTNARRAPPPTGTKPAVTNNR |
1 | 3bogA | 0.12 | 0.10 | 3.47 | 1.68 | SPARKS-K | | -----------CKGADGAHGVGCPGTAGAAGSVGGPGCDGGHGGNGGNGNPGCAG---GVGGAGGASGGTGVGGRGGKGGSGTPKGADGAPGAP------- |
2 | 3boiA | 0.14 | 0.11 | 3.74 | 1.28 | MUSTER | | -------------------CKGADGAHGVNGCPGTAGAAGSVGGPGCDGGHGGNGGNGNPGCAGGVGGAGGASGGTGVGGRGGKGGSGTPKGADGAPGAP- |
3 | 3j9aA | 0.11 | 0.08 | 2.87 | 1.51 | Neff-PPAS | | ---------------------NFKVRDPVIQERLDHDYAHHPLVARMNTLDQGNMSQAEYLVQKRIAHHYYEAYLRRMGGIQRRDHLQTLRDQKP------ |
4 | 3boiA | 0.14 | 0.11 | 3.74 | 1.64 | SPARKS-K | | ----------CKGADGAHGVNGCPGTAGAAGSVGGPGCDGGHGGNGGNGNPGCAG---GVGGAGGASGGTGVGGRGGKGGSGTPKGADGAPGAP------- |
5 | 2xd8A | 0.15 | 0.14 | 4.65 | 0.45 | FFAS-3D | | ----ANANQVALGRSNLSTGTGYGGATDKLKLFSGEMFKGFQHETIARDLVTKRTLKNGKSLTGRMTSSFHTPGTPILGNADKAPPVAEKTIVMDD----- |
6 | 3zldA1 | 0.14 | 0.05 | 1.70 | 0.19 | HHpred | | ----------------------------------GRDTEGYREVGGKCP---SAFVAEGNPDAWQSACPNDAVK--------------------------- |
7 | 3bogA | 0.12 | 0.10 | 3.47 | 1.26 | MUSTER | | ----------CKGADGAHGVGCPGTAGAAGSVGGPGCDGGHGGNGG----NGNPGCAGGVGGAGGASGGTGVGGRGGKGGSGTPK-GADGAPGAP------ |
8 | 2k8oA | 0.11 | 0.04 | 1.42 | 0.67 | CNFpred | | -------------------------AEDSEQLASGQEAGDPGCLKPLHEKDSESGGGKDG----------------------------------------- |
9 | 1iyjA | 0.20 | 0.03 | 0.95 | 0.43 | HHsearch-2 | | EDDFSNQLRAELEKH-------------------------------------------------------------------------------------- |
10 | 2mk0A | 0.13 | 0.11 | 3.76 | 1.39 | Neff-PPAS | | -----------------EPSSQPSDCGEVIEECPIDACFLPKSDSARPPDCTAVGRPDCNVLP-FPNNIGCPSCCPFECSPDNPMFTPSPDGSPPNCSPTM |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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