Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | LFFCRSLYLYGLCCRFCLFISIFYVSPRLPSSGNRRIVLAVFYLYNFVWVIRVFFCCVFSVGLFSLFIIEGGGFIDCPGLKLFTRFI |
1 | 3j6vL | 0.23 | 0.20 | 6.13 | 1.30 | MUSTER | | RPQLK-----GVVLR------TFIRKPKKPNSANRKCCRV--RLSTGREAVCFIPGEGHNLQEHHVVLVQGGRTQDLPGVKLKVRGK |
2 | 6nbqC | 0.13 | 0.13 | 4.40 | 1.14 | SP3 | | YEYFLGFLIICSLVPVLALAASALLGAWIQFN-VRYYMFALVFVIFDVETVFLYPWAVAFHQLGLLAFIEALIFIAILVVALVYAWR |
3 | 2yevA | 0.10 | 0.10 | 3.79 | 0.84 | SPARKS-K | | DFYLAAILLLGFSSLLGNANFVATIYNLRAQSLWKMPIYVWSVFAASVLNLFSLAGLTAATLLVLLERKIGLSWFNPAVGGDPVLFQ |
4 | 5uz7R | 0.12 | 0.11 | 4.09 | 0.59 | FFAS-3D | | LYYLAIVGHSLSIFTLVISLGIFVFFRSLGCQRVTLHKNMFLTYILNSMIIIIHLCKILHFFHQYMMACN-YFWMLCEGIYLHTLIV |
5 | 3j6vL | 0.24 | 0.17 | 5.37 | 0.38 | HHpred | | ------------------VLRTFIRKPKKPNSANRKCCRVRL--STGR-EAVCFIGH--NLQEHHVVLVQGGRTQDLPGVKLKVR-- |
6 | 5njtL2 | 0.26 | 0.22 | 6.72 | 1.28 | MUSTER | | --QKR-----GVCTR------VGTMTPKKPNSALRKYARV--RLTNGIEVTAYIPGIGHNLQEHSVVLIRGGRVKDLPGVRYHVRGA |
7 | 6f34A | 0.19 | 0.16 | 5.17 | 0.92 | CNFpred | | --LVLSFILSGLACVFAALCYAEFAS-TVPVSGSAYTYSYATFGELIAWILGWDLILEYGVASSAVAVGWSGYFQ------------ |
8 | 3j6vL | 0.23 | 0.18 | 5.78 | 0.74 | HHsearch-2 | | RPQLK-----GVV------LRTFIRKPKKPNSANRKCCRVRL--STGRCFIPGEGH---NLQEHHVVLVQGGRTQDLPGVKLKVRGK |
9 | 5unfA3 | 0.05 | 0.05 | 2.24 | 0.89 | Neff-PPAS | | AQWSAGIALMKNILGFIIPLIFIATCTNSYGKNRITRDQVLKMAAAVVLAFIICWLPFHVLTFLDALAWMGVINSCEVIAVIDLALP |
10 | 5njtL | 0.21 | 0.18 | 5.83 | 0.62 | HHsearch | | KGYNESPQKRGVC------TRVGTMTPKKPNSALRKYARVRL--TNGI-EVTAYIGH--NLQEHSVVLIRGGRVKDLPGVRYHIRG- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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