Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | YNQEGYEFKITQAFNCVNDAIALTCSSVNHFLDIPKVINKYGVLATVALSKTEQLNLTDTKLESIVKNGFIIYEVVETIIKASNAITKDQQLFSKAIDDGINAVNKLQEAAIHLSSVGEPIVEYVTSFFGSHDQHEPLQHESLLFETYTPNSTSAVIEDYKLIGSNAQLIAVEI |
1 | 5cwnA | 0.16 | 0.16 | 5.14 | 0.78 | SPARKS-K | | GDEEEFRKAAEKALELAKRLVEQAKKEPELVLEAAKVALRVAELAAKVFKKAAESALEVAKVEVASKEGDLVLEAAKVALRVAELAAKDKEVFKKAAESALEVAKRLVEVASKLVEEAAKVAEEVRKLAKKQGDEEVYEKARETAREVKEELKRVREEKGGWLEHH-------- |
2 | 3hhmB2 | 0.06 | 0.04 | 1.71 | 0.73 | FFAS-3D | | --------RLYEEYTRTSQEIQMKRTAIEAFNETIKIFEEQCQTQERYYIEKFKREGNEKEIQRIMHN-------YDKLKSRISEIIDSRRRLEEDLKKQAAEYREIDKRMNSI----KPDLIQLRK----------------------------------------------- |
3 | 2nn6A | 0.15 | 0.12 | 4.05 | 0.29 | HHpred | | -NHDG---------NIIDAASIAAIVALCHF-RRPDVIHHMPICVSFAFFQQTYLLVDPNEREERVMDGLLVIAMNKH--REICTIQLLKDQVLRCSKIAGVKVAEITELILKA----------LENDQKVRKEGGKFGFASIANQRITAF-KME-----KAPGGG-------- |
4 | 6b5bA | 0.11 | 0.11 | 3.92 | 0.66 | MUSTER | | SSDRQEDQDLGLYYLRQIDSPLKAINSFNIFLYYVSSHSSSKA-APTVVSHLLQLVDEKESLENMSENEDYM-KLHPQTFLWFQFVRGLWLVSPESSSSFVSEHLLRLALIFAYESNTVACSPFILQFL--RGKTLALRVLNLQYFRDHPESLLL-LRSLKVSIFAQDEEIIKN |
5 | 3vuoA | 0.08 | 0.06 | 2.26 | 0.63 | CNFpred | | ------FKDLNNKLYEIYSKNRVYFRKIYFNFLDQWWTEYYSQYFELICMAKQSILAQESVVKQIIQNKFTDLSIPPDTLKLIKETTEKFIDLSNESQISMNRVDNFLNKCVFVEDIYPKFISYMEKYIN-------------------------------------------- |
6 | 2pffB | 0.17 | 0.16 | 5.27 | 0.46 | HHsearch-2 | | GNDKDYLLSIPISCPLIG-VIQLAHVVTAKLLGFPGELRSYLKVTAVAIAETDSW---ESFFVSVRKAIYSILEDSLENNEGVPSPMLSISLTQEQVQDYVNKTNSHLPAGKVEISLVNGAKNLVLNPSGLDQSRIPFSERKLKFSNRFLP---------VASPFHSHLLVIQI |
7 | 4z9hA | 0.09 | 0.09 | 3.25 | 0.83 | Neff-PPAS | | FSSLHHSQKSFVVSNQLREQQGELTSTWDLMLQTRINLSRSAVRMMM-----------DSSNQQSNAKVELLDSARKTLAQAATHYKKFKSMAP--LPEMVATSRNIDEKYKNYYTALTELIDYLDYGNTGAYFAQPTQGMQNAMGEAFAQYALSSEKLYRDIVTDNADDYRFA |
8 | 4x8kA1 | 0.18 | 0.06 | 1.88 | 0.29 | HHsearch | | --NAEEEVELA-------KRIEAGLYAT-QLM------------------------------TELSERG-------------EKLPAAQRRDMMWICRDGDRAKNHLLEA---------------------------------------------------------------- |
9 | 4z9hA | 0.09 | 0.09 | 3.25 | 0.54 | SP3 | | FSSLHHSQKSFVVSNQLREQQGELTSTWDLMLQTRINLSRSAVRMM-----MDSSNQQSNAKVELLD------SARKTLAQAATHYKKFKSM--APLPEMVATSRNIDEKYKNYYTALTELIDYLDYGNTGAYFAQPTQGMQNAMGEAFAQYALSSEKLYRDIVTDNADDYRFA |
10 | 6f0kH | 0.09 | 0.07 | 2.81 | 0.67 | PROSPECTOR2 | | YGVALTLAQIEAASEQVAQDLEQALAELEALRLL---------------------ARRDETLAPYVA------QYEAILEAHQQAVLEFEHWKEQVAAHPNRTLGAITARHEALLQQYADVAWAVAQHVNPALLARAYTSSGPRFFFYVEQAVPPLQVVRYLAAQ--------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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