Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | AAKNAYYDKNFKDYEILKPRSLEDHVIVKGEEGCDLIGREIKDLVFADCVKGFDEILAQEPQEGEIFKFDDIKIKDEVIKNLKIVIKGYDESNDNLKFDLDKLSLSAPYRYALSNEGFEMNIFLNEEPKRVLEFLSTFEYDYKKEEDRARHIFVFINENMIYEKI |
1 | 6c0bA2 | 0.11 | 0.09 | 3.27 | 0.58 | SPARKS-K | | ETNYTLYVGNRQNMIVEPNYDSSTVINFSQKYG---IDSCVNKVVISPNIYT----------DEINITPVYETNN----TYPEVIVLDANYINEKINVNIN-----DLYVWSNDGNDFILMIRFVFKDKTLANKL-SFNFSDKQD--------VPVSEIILSFTP |
2 | 2v42A2 | 0.09 | 0.05 | 2.07 | 0.50 | FFAS-3D | | -------EKAKFSWTP--TWLPQGFSEVSSSRRPLPTNMPIESRLYSD-----------------------------GLFSFSVNVNRATPSSTD-----QMLRTGRRTVSTSVRDNAEITIVGELPPQTAKRIAENIKFG------------------------ |
3 | 5j7rA | 0.08 | 0.05 | 2.14 | 0.23 | HHpred | | ---------------------DLSLYFDGTDEQNPKIEQQEILVDGDE--ILGQYLIQALIQ-------------------------GPSQ-KGSL---APILPKDTKLLFDIKDDIAIINLSKEASATKEQATLEGIIATIT-QIPSINKINILVDNQ-V-DSL |
4 | 2vbeA4 | 0.12 | 0.12 | 4.05 | 0.74 | MUSTER | | GFKNAVYVHDCLDLHEQLDDYCGSTGVVIENVNGGFSFSNSWIAADADGTEQFTGI---------YFRTPTSTQSHKIVSGVHINTANKNTAANNQSIAIEQSAIFVFVSGTLTGDEWAVNIVDINECVSFDKCIFNKPLRYLR-SGGVSVTDCYLAGITEVQKP |
5 | 1vpkA | 0.12 | 0.08 | 3.02 | 0.69 | CNFpred | | ------------ITELSLE---GDALVISSGTVFRIT-ESGITFEVDT--SLLEEMVEKV------IFAAAKDEFMRNLNGVFWELHKN-----LLRLVAS------GFRLALAEEEASFLLSLK-SMKEVQNVLDNT---------TEPTITVRYDGRRVSLST |
6 | 4qhzA | 0.11 | 0.08 | 3.04 | 0.40 | HHsearch-2 | | SDAIVLFDGDLSAWESV---GGAAEWDVHDNKG-DIQT------QFNDFQ-HIEWQVPTNRGNSGIFLQG-----------YEVQVLDCYN-NPT----YVNGQTGSIYKQSIPLNVYDIIYTAPT---------------FKEGYRTHPTVTVIQNGVVLQNHT |
7 | 2vbeA4 | 0.12 | 0.12 | 4.04 | 0.76 | Neff-PPAS | | GFKNAVYVHDCLDLH-------EQLDLDYCGSTGVVIENVNGGFSFSNSWIAADADGTEQFT-GIYFRTPTSTQSHKIVSGVHINTANKNTAANNQSIAIEQSAFVFVSGCTLTGDEWAVNIVDINECVSFDKCIFNKPLRYLR----SGGVSVTDCYLAGITEV |
8 | 6bk6A1 | 0.11 | 0.08 | 2.82 | 0.50 | HHsearch | | IYTPGANERKFNNYMY---MICYGF--VEDV---KIRT--IAAYPLGKSTSHPQDLLEELCSTEKI-VFGSSGPLHHLLPWKKILTGGSIFNAVKVCRNVDQIQLEKQQSLRIF----FLSITKLNDSG------------------------------------ |
9 | 6c0bA2 | 0.07 | 0.06 | 2.55 | 0.56 | SP3 | | ----IKFNTLETNYTLYVGNR-QNMIVEPNYDSSTVINFSQKYL--YGIDSCVNKVVISPNIYTDEINITPVYETNNTYP--EVIVLDANYINEKINVNINDLSIR--YVWSNDGNDFILMSTSEENKVS----QVKIRFVNVFKDKTLNKLSFNFSDKQDVPVS |
10 | 2x12A | 0.04 | 0.04 | 2.12 | 0.56 | PROSPECTOR2 | | TKTTFTFSNGGTQYYWAGGNANNLKNPISSISAVYDSATGKISWTVEYDPTTILKSPALKTLKTYTGIYIDTSSDSKLSTPTNVLI----DGAATNPVTNFYGNGSKGIEYVSKGTTITFDTAFSGRANDLADLEIKLAATTLSDPHNGQTAPYVIANDSGTAID |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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