Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220 240 260
| | | | | | | | | | | | | |
| Seq | YNRSLIPNNTQRTTIKSRLLAQTQKRNPHYHNDPELKEIIEKLNEESIKKYQQTHDPYKQLKEVVEKNGTKYTDGNDAEPMSTTEKDLLETYEEIFGKENHMLKSGMYPNDDEKSSTCECTDTNTKLARTKGKDKYLENLKERCKGGIGFCSVGSVLLTLVGLIAAKAAATKHFVDIQACLSHMAMFKLFSVQALGEAIKAGGATCIKAAGDIAGTAAPAAMTTFPPYGIAALVLLILAVVLIILYIWLYRRRKKSWKHECKKHLCR |
1 | 5cwpA | 0.14 | 0.10 | 3.56 | 0.70 | SPARKS-K | | ---------------------------------------MSSDEEEARELIERAKEAAERAQEAAERTGDP-----RVRELARELKRLAQEAAEEVKRDP----------------------------SSSDVNEALKLIVEAIEAAVRALEAAERTLARELVRLAVEAAEEVQRDVNEALKLIVEAIEAAVRALEAAERTGDPEVRELARELVRLAVEAAEEVQNPVNEALKKIVKAIQEAVESLREAEPEKREKARERVREAVER |
2 | 4n6hA | 0.17 | 0.13 | 4.33 | 0.91 | FFAS-3D | | ----------------------------------DLEDNWETLN-DNLKVIEKADN-AAQVKDALDAQKATPPKLEDKSPDSPEMKDFRHGFDILVGQIDDALKLA----NEGKVKEAQAAAEQLKTTRNAYIQKYLGARSASSLALAIAITALYSAVCAVGLLGNVLVMFGIVRATNIYIFNLALADALATSTLPFQSAKYGELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHKAKLINICIWVLA---------------- |
3 | 5uqeA | 0.17 | 0.14 | 4.70 | 0.42 | HHpred | | FY-TI-AEG-QEKIPVHKFITALKSTGLR-TSDPRLKECMDMLRLTL----QTTSDDKDLFKKCVQSNIVAFRRKLVIPDFMSFTSHIDELYESAKKQ-----SGGKVPQFSDLWGVSVCGDTKAIAVNDLGTEYVHRYV-GKEPSGLRFNKLFGAIVVLIKVNAEKFYVMQFGDRNFAIGYYLKEKKCFPETDMVGILDFYFQLCSVTCESASVMAATLANGGFCPITGPEAVRNTLSLMHS------------------------ |
4 | 5yz0A | 0.12 | 0.12 | 4.12 | 0.75 | MUSTER | | FPFEAEAYRNIEPVYLNMLLEKLEDGVLMRLKSDLLKAALCHLLQYFLKFVPAGYESALQVRKVYVRNICKALL-DVLGIEVDAEYLLGPLYAALKMESMEIIEEIQCQTQQENLSS----NSDGISPKRRRLSSSLNPSKRAPKQTEEIKHVDMNQKSAESLQISLEYSGLKNPVIEMLEGIAVVLQLTALCTVHCSHQNMNCRTFKDCQHKSKKKPSVVITWMSSLLESVQKLDLIDKVVKIYDALIYMQVNSSFEDHILEDLCG |
5 | 6c3oE | 0.12 | 0.09 | 3.34 | 0.77 | CNFpred | | ---------------HRSLLNRIILAPMRFFETTPLGSILNRFSSDCNTIDQHIPSTLECLSRSTL-----------------LCVSALAVISYVTPVFLVALLPL----------AIVCYFIQKYFRVA---SRDLQQLDDTT-----QLPLLSHFAETVEGLTTIRAFRYEARFQQKLLEYTDSNNIASLFLTAANRWLEVRMEYIGACVVLIAAVTSISNSL-SAGLVGLGLTYALMVSNYLNWMVRNLADMELQLGAVKRIHG |
6 | 2pffB | 0.17 | 0.15 | 4.93 | 0.55 | HHsearch-2 | | EHVLLVPT--ASFFIASQLQEQFNKILPEPTTPAELGKFLGYVSSVLLTEFENCYLEGNDIHALAAKL----LQENDT--TLVKTKELIKNYITPFDKKSSALFRAVGEGNAQLTYFEELRDLYGDLIKAETLSELIDAEKV-FTQGLYLLSIPIPLIGVIQLAHYVVTAKLL---------------GFTPGELRSYLKGAT-----GHSQGLVTAV--AIAETDSWSFFVSVRKAITVLFFIGVRSLENNVQD-YVNKTNSHLPA |
7 | 5cwpA | 0.15 | 0.12 | 4.01 | 0.89 | Neff-PPAS | | ---------------------------------------MSSDEEEARELIERAKEAAERAQEAAERTG-----DPRVRELARELKRLAQEAAEEVKRD----------------PSSSDVNEALKLIVEAIEAAVRALEAAERTGDPEVRELARELVRLAVEAAEEVQRNPSSSDVNEALKLIVEAIEAAVRALEAAERTGDPEVRELARELVRLAVEAAEEVQRPSSEEVNEALKKIVKAIQEAVESLREAEESGDPEKREKARE |
8 | 2k1lA | 0.21 | 0.03 | 0.95 | 0.39 | HHsearch | | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SPPVSRGLTGGEIVAVIF------------GLLL--GA--ALL-LGILVFRSRRA------------ |
9 | 5mlzA | 0.14 | 0.13 | 4.34 | 0.85 | SP3 | | YNERNLEE------LFSRIDNALQGLN---------YEIVDRT-WEKAQELSSKYEVIPKLIEAIKNGGSRYVKGGKVENWPFYRKLISKGAIMVGRIALPKIRDIKDPVSEGVELNPIGFKILMEILIKKTIFEYLRHIYRLMKWGLSGILVNEGFLWLFVNLGIPKEIAVIPAVELSILNNFFWNDIWTFKDIRRGSIFSRLLKFHIAALSGAVVNFIVYWILLFLGIHYLIANLVGIVLSFGVRYVINRHVT-WAT-------- |
10 | 5cwmA | 0.14 | 0.11 | 3.83 | 0.96 | PROSPECTOR2 | | DPEDELKRVEKLVKEAEELLRQAKE-----KGSEEDLEKALRTAEEAARE-------AKKVLEQAEKEGD-----------PEVALRAVELVVRVA-------------------------ELLLRIAKESGSEEALERALRV------AEEAARLAKRVLELAEKQGDPEVALRAVELVVRVAELLLRIAKESGSEEALERALRVAEEAARLAKRVLELAEKQGDPEVARRAVELVKRVAELLERIARVREEARELQERVKELRER |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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