Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | QNPAYNRVDINGRYAIAKVGYDFALGEVQCDNRDGAQPYLSTLAVYQTPITLVNDFVHRSLCAEIRRGTVTDITTMLTEAERLSLLCLNAFEQLE |
1 | 5v1qA1 | 0.08 | 0.06 | 2.53 | 0.91 | SPARKS-K | | -------RTISEDILFRLEKFGGILINK----TNFERIELD------ETEAFFLYLVQNHGIEIATSFEMGKLERALSLPYETLQNARKHVAKLK |
2 | 3tj4A1 | 0.03 | 0.03 | 1.76 | 0.69 | FFAS-3D | | -----MKITAVEPFILHLPHWGVVGAKITT---SDGIEGYGFTGTHAHLPSDITSCISDCYAPLLLGEDASDHSRLWTKLHLALAAVDVALWDI- |
3 | 3q9dA2 | 0.08 | 0.06 | 2.47 | 0.24 | HHpred | | ------------INFITSDMRCIFLNRLARV---DGQEF----LLMTDVQNTC-HLIRHLLARLAQKNGEKNLQEIQEEITSLKNHFDELTKA-- |
4 | 1a87A | 0.17 | 0.17 | 5.55 | 0.66 | MUSTER | | LAKLIDAESIKGVYTFHTRKGQYVKVTVPDSNIDKMRVDYVNWKGPKYNNKLVKRFVSQFLLFRKEEKEKNEKEALLKASELVSGMGDKLGEYLG |
5 | 3i6tA | 0.11 | 0.11 | 3.79 | 0.56 | CNFpred | | --DQSQIIAGFTLWHLSLPVVEVVVLRLQADS---GAVGYGEASPWVGSVEATYAALDRYLRPLVLGRAVGDHAAIMEDARAAVAHCTEAKAALD |
6 | 5yx5A2 | 0.21 | 0.11 | 3.35 | 0.25 | HHsearch-2 | | -----------------------------------------DEFYYPSLESVVHTFCVI----DTRE--HNRVSACLCKLQVLCALFKNHVKELE |
7 | 5v1qA1 | 0.03 | 0.03 | 1.78 | 0.92 | Neff-PPAS | | -------RTISEDILFRLEKFGGILINKTNFERIELDETEAFFLYLVIATSFFKKEIEMGKLERALSLNIYSDNNPYETLQNARKHVAKLKKHNI |
8 | 6i3mA1 | 0.11 | 0.06 | 2.26 | 0.51 | HHsearch | | -----------------------------MS-------EFNITETMTMPIAAIEALVTL-----LRIKTPETAAEMINTIKSSTEELIKSIPNV- |
9 | 4k12B | 0.10 | 0.08 | 3.11 | 0.78 | SP3 | | SERDKARKEVEEY-----------VKKIVGESYAKSTKKRHT-----ITVALVNELNNIKNEYLNKIVESTSESELQILMMESRSKVDEAVSKFE |
10 | 4ttpA2 | 0.10 | 0.09 | 3.52 | 0.47 | PROSPECTOR2 | | ---MVYSVGLELGINV-ITSPYCLIEIPLLFNKHHYPYLQKVLLVIAPLESQLDRIVKRDALAILATQPNSGLSELKAKVNKLHQKYLREAKIKQ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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