Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | MSEMPGYIKRELDQLQEVIGPYMKKISKYSIWTLPLLLVSAFNLIFMVFTGDINGENALAIGLFALMGAIGAALFKEVRIQQNELRKKSANYMIDRIKNSEIANDYHKKQYIQLIKNQPASKTINHFINFLIEENNRKR |
1 | 5cwjA | 0.10 | 0.09 | 3.45 | 0.91 | SPARKS-K | | KSGTEESLRQAIEDVAQLAKEAIRVILRIAKESEEALRQAIRAVAEIAKEAQDS---------EVLEEAIRVILRIAKESGSEEALRQAIRAVAEIAKEAQ--DPRVLEEAIRVIRQIAEESARRQAERAEEEIRRRAQ |
2 | 5h7bA2 | 0.09 | 0.09 | 3.24 | 1.07 | FFAS-3D | | ---LPNLNEEQRNAFIQSLKD--DPSQSANLLAEAKKLNEQQAAFYEILHLPNLNEEQRN----AFIQSLKDDPSQSANLLAEAKKLNEQQAAFYEILHLPNLNEEQRNAFIQSLKDDP-SQSANLLAEAKKLNDAQ-- |
3 | 4iuwA2 | 0.06 | 0.05 | 2.22 | 0.32 | HHpred | | --ADSNLTDDIRQKLTKTAKTLPLQYARFAKANDQLGSDDLRQLAGQYLAGQPEASSWTKHAFGIANEYFDDVIGADAKADVTAMVKQILAQYRVQLENNTWLSPATKQKAMRKLATMQVK------------------ |
4 | 1wp9A | 0.14 | 0.14 | 4.88 | 0.67 | MUSTER | | RVDLPEIYKEVRKLLREMLRDALKPLAETGLLKKEVLRAGQIINEEMAKGNHDLRGLLLYHAMALKLHHAIELLETQGLSALRAYIKKLYEEAKATKASKEIFSDKRMKKAISLLVQAKEIPKMDKLKEIIREQLQRKQ |
5 | 3n37A | 0.12 | 0.12 | 4.04 | 0.67 | CNFpred | | ------PLQRKAQIIQQHYRDDPLKKKIASVFLESFLFYSGFWLPMYFSSRGTNTADLIRLIIRDEAVHGYYIGYKYQKNMSLGQREELKSFAFDLLLEL----YDNELQYTDELYETPWADDVKAFLCYNANKALMNL |
6 | 5cbnA2 | 0.14 | 0.07 | 2.46 | 0.60 | HHsearch-2 | | -------------------------------------------------------------TAFDISIDNGNE--DLAEILCKNKAQQA---AFYCILHLPNLNEEQRNAFIQSLKDDPSQ-SANLLAEAKKLNDAQAP |
7 | 5h7cA3 | 0.13 | 0.13 | 4.50 | 0.71 | Neff-PPAS | | VIYIVKILAELAKQSSELVNEIVKQLAEVAKEADKELVIYIVKILAELAKQSTDSELVNEIVKQLEEVAKEATDKELVEHIEKILEELEQQSAFYEILSLPNLNEEQRNAFIQSLKDDSQSANLLAEAKSLNVNQAVKQ |
8 | 5cbnA2 | 0.14 | 0.07 | 2.45 | 0.68 | HHsearch | | -------------------------------------------------------------TAFDISIDNGNE--DLAEILCKNKAQQA---AFYCILHLPNLNEEQRNAFIQSLKDDPSQ-SANLLAEAKKLNDAQA- |
9 | 4mz0A2 | 0.12 | 0.12 | 4.07 | 0.85 | SP3 | | YQQA-PVFRKALEQCNEILKSLLEILYDQTAYTQPCLFALEYALFKLWQSWGIQPDVVMSVGEYVAATVAG-VF---SLEEGLKLIAARGRLMQQLPAGSVIASESKVLEIFKAMSLEEKAEAVGAIATHLESLSIKTK |
10 | 5h7cA3 | 0.14 | 0.14 | 4.69 | 0.73 | PROSPECTOR2 | | DSELVNEIVKQLELVIYIVKILAESELVNEIVKQLALVIYIVKILAELAKQSTDSELVNEIVKQLEEVAKEATDKELVEHIEKILEELEQQSAFYEILSLPNLNEEQRNAFIQSLKDDPSQSALAEAKSLNVAEKAKEA |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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