Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | MDMFFAYLLVASATPLFIWLDNKKVALSAIPPIILMWVFFFFYATESLSPLGHTLMIILFAVNVIVAHIAAFIIYGLPFLRRKR |
1 | 5ezmA3 | 0.10 | 0.10 | 3.57 | 1.06 | SPARKS-K | | IGMAIVAACGLLASPVVATLNANSFYRAYAVWVAVAFVVMLLGIAVARLLLRRGVLPSVAVYAMGMYLGFTVALLGHETVGRPA |
2 | 6nbqE | 0.14 | 0.14 | 4.86 | 1.10 | SP3 | | VLILAALLFCIGIYGLVTSRNAVRVLMSIELLLNAVNLNLIGFANYLDGQQIKGQVFAVFVITVAAAEAAVGLAIILAIYRNRD |
3 | 5ogeA2 | 0.07 | 0.07 | 2.92 | 1.01 | SPARKS-K | | -AVPIYTIFKNLTIILIAYGEVELSSFLLMVLSSVVATWTTYSMVGALNKLPIALSGLIFILSIFIGFLSGIIYAVAKQKKQQA |
4 | 4he8K | 0.11 | 0.10 | 3.46 | 0.73 | FFAS-3D | | --LLTSALLFALGVYGVLTRRTAILVFLSIELMLNAANLSLVGFARAYGLDGQVAALMVIAVAAAEVAVGLGLIVAI------- |
5 | 6nbqA | 0.21 | 0.19 | 6.07 | 0.29 | HHpred | | -PMLMMLIVATVGVLVAVWLERKISAAVQQPEYIGPLGILLKLIFKDVLPANRWLFTLGPAVVVIPVFLSYIIV---PFGQN-- |
6 | 6eznF | 0.12 | 0.12 | 4.18 | 0.79 | MUSTER | | GGYVFITNLIPLHVFLLILMGRYS---SKLYSAYTTWYAIGTVASMQIPFVGFLPIRSNDHMAALGVFGLIQIVAFGDFVKGQI |
7 | 5xtcr | 0.08 | 0.08 | 3.25 | 0.87 | CNFpred | | AYPFLVLSLWGMIMTSSICLRQTDLKSLIAYSSISHMALVVTAILIQTPWSFTGAVILMIAHGLTSSLLFCLANSNYERTHSRI |
8 | 1s5lx | 0.18 | 0.08 | 2.70 | 0.61 | HHsearch-2 | | ----------------------------------------------TITPSLKGFFIGLLSGAVVLGLTFAVLIAISQIDKVQR |
9 | 6a2jA3 | 0.07 | 0.07 | 2.92 | 0.92 | Neff-PPAS | | LLLFVWIIVAAVHAITSYKDQKQIFWGWISCLIFITLQALSGIMIVYSELALGFALAHSFFIACLFGVLCYFLLLIARFRYES- |
10 | 1s5lx | 0.16 | 0.07 | 2.37 | 0.32 | HHsearch | | ----------------------------------------------TITPSLKGFFIGLLSGAVVLGLTFAVLIAISQIDKVQ- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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