Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | IEFGYCDSSGKLAPRCVAKDSSDNARRAIATYILTLNDIDIVRLVLDDLKNSELTWKYIGTEAFDAFIDHNRVKLGFDLLDKCDEIDDESEHTEYLIPRKKLTYLLERWLAFIQKPIPDPNYVEIIDSEDAY |
1 | 1vpkA | 0.14 | 0.13 | 4.39 | 0.87 | SPARKS-K | | LRLVASD--GFRLALAEEQENEEEASFLLSL--------KSMKEVQNVLDNTTEPTITVRYDGRRVSLSTNDVETVMRVFPDYKRVIPETFKTKVVVSRKELRESLKRVMVIASK--GSESVKFEIEENVMR |
2 | 4q7oA | 0.08 | 0.07 | 2.67 | 0.54 | FFAS-3D | | --------KNNIFLNLKSINNNHFVISIFFETIYQFETKDTLLECFKNITTTG----HFGVIGAQYEKIDPSIYFSV---------GDDFNPEELIIPINLAYHYFNIASDFLIAHPEYQ--KKCKEIQKTY |
3 | 5g0zA | 0.17 | 0.13 | 4.22 | 0.28 | HHpred | | --------SRHDGTSCVIDNHH---LKSLGAVLNDVDRIREAEYEIIDIADQYMVTEDFRGPGKNVRVHPDTMKLVC-NW-----------------SGKEF--LRETWTRFISEEFPITTDQEIMDLW--- |
4 | 5hkqI | 0.11 | 0.09 | 3.27 | 0.62 | MUSTER | | --------NKYLF---ELPYERSEPGWTIRSYFDLY-NENRFLDAVENIVNKELDGIYCNDNSYDESEHFEGVEFAVG--------YPPDEDDIVIVSEETCFEYVRLACEKYLQ--LHPEDTEKV---NKL |
5 | 6manA | 0.14 | 0.13 | 4.39 | 0.72 | CNFpred | | FYAASTDG-HRLSVSSVVLAEKIEDFGVILP-------QKSAEEILKIVKDSKNADIEILLSSNKIKFICENVIMLSKLIDDYSSFIPENSSSKLVINRKIFADTIERIAIITVE----KFRAVKLSLSGEA |
6 | 1vt4I3 | 0.16 | 0.13 | 4.29 | 0.89 | HHsearch-2 | | ---EYALHDHYNIP----KTFDS--DDLIPPYLQYFSHLERMTLFFRFLEQKIRH----DSTAWNASGSINTLQQLK-FYKPY--IC-D--------NDPKYERLVNAILDFLPKIEENLICSKYTDLMAED |
7 | 3akcA | 0.09 | 0.09 | 3.43 | 0.70 | Neff-PPAS | | VRLLAQAEGNRVLADGEDLTSFLHTPEVDRVVSAVARLPGVRAWVNRRLKEVPPPFVAEGRDMGTAVFPEAAHKFYLTA---SPEVRAWRRARERPQAYEEVLRDLLRRDERDKAQSAPAPDALVLDTGGMT |
8 | 4hxhC | 0.11 | 0.05 | 1.91 | 0.40 | HHsearch | | -------------------DFET-DESVLMRRQKNYNTIAYDR-YIKEV-----P--------------G--------I-HPK--TPNKF----KKYSRRSWDQQIKLWKVALHFWDP-------------- |
9 | 5hkqI | 0.12 | 0.10 | 3.47 | 0.64 | SP3 | | --------NKYLF---ELPYERSEPGWTIRSYFDLYN-ENRFLDAVENIVNKELDGIYCNDNSYDESEHFEGVEFAV--------GYPPDEDDIVIVSEETCFEYVRLACEKYLQ--LHPEDTEKV---NKL |
10 | 2l82A | 0.08 | 0.08 | 2.94 | 0.49 | PROSPECTOR2 | | MSQIFVKRQGVRVVLLYSDQDEKRRRERLEEFVRTVEDKEDFRENIREIWERYPQL-----DVVVIVTTDDKVEVFVVYNNKDDDRRSDGVDVRTVSDKEELIEQVRRFVRKVGSLEHHHHH---------H |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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