Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | SMDELCREPGAMCGYVEKALALSNWERRLAVITRDGKLVIYKYYLLDICPGEPLMGKTYQLNKVKYLHLERFENGDIISRIKTMDGKRVKLKLTGEYATAWAAKI |
1 | 1unqA | 0.15 | 0.14 | 4.78 | 0.87 | SPARKS-K | | ---SMSDVAIVKEGWLHKRGEIKTWRPRYFLLKNDGTFIGYK----ERPQDVEAPLNNFSVAQCQLMKTERPRPNTFIIRCLQWT-TVIERTFHVEEREEWTTAI |
2 | 1btnA | 0.13 | 0.10 | 3.66 | 0.56 | FFAS-3D | | -----------------KKASSRSWHNVYCVI-NNQEMGFYKDAKSAASGIPYHSEVPVSLKEAICEVALDYKKKKHVFKLRLSDGNEYLFQAKDDEENTWIQAI |
3 | 2bcjA2 | 0.15 | 0.13 | 4.48 | 0.45 | HHpred | | ---DYAGKDCIMHGYMSKMGNPTQWQRRYFYLF-PNRLEWRG------EGEAP-QS-LLTMEEIQSVEETQI-KERKCLLLKIRGGKQFVLQCDSDELVQWKKEL |
4 | 1unqA | 0.17 | 0.16 | 5.33 | 1.00 | MUSTER | | ---SMSDVAIVKEGWLHKRGEIKTWRPRYFLLKNDGTFIGYKERPQDVDQREAPL-NNFSVAQCQLMKTERPRPNTFIIRCLQWTTVERTFHVETEEREEWTTAI |
5 | 1w1dA | 0.17 | 0.13 | 4.37 | 0.91 | CNFpred | | ----------LKMGPVDKRK-GLFARRRQLLLTEG-PHLYYVDPV-------KVLKGEIPWS--QELRPEAKNFKTFFVHTP---NRTYYLMDPSGNAHKWCRKI |
6 | 6bbpA3 | 0.15 | 0.14 | 4.78 | 0.64 | HHsearch-2 | | LGNDLTHTFPDREGWLLKLGGVKTWKRRWFILT-DNCLYYFEYT------TDKEPRGIIPLENLSIREVE-DPRKPNCFELYNPSHVVYRISAPSEEKEEWMKSI |
7 | 1unqA | 0.18 | 0.16 | 5.29 | 0.97 | Neff-PPAS | | -------VAIVKEGWLHKRGEIKTWRPRYFLLKNDGTFIGYKERPQDVDQREAPL-NNFSVAQCQLMKTERPRPNTFIIRCLQWT-TVIERTFHVEEREEWTTAI |
8 | 1fb8A | 0.14 | 0.12 | 4.25 | 0.82 | HHsearch | | -LVPTAPSLGTKEGYLTKQGGVKTWKTRWFTLH-RNELKYFKD------QMSPEPIRILDLTECSAVQFDYSQERVNCFCLVFP-FRTFYLCAKTGEADEWIKI- |
9 | 2p0fA | 0.18 | 0.17 | 5.56 | 0.81 | SP3 | | ------SHEVEKSGLLNMTKLRKNWGPSWVVLT-GNSLVFYRAPSSGWGPAGSRPESSVDLRGAALAHGRHLSSRRNVLHIRTIPGHEFLLQSDHETLRAWHRAL |
10 | 4aq1A3 | 0.06 | 0.06 | 2.53 | 0.51 | PROSPECTOR2 | | EVPVQVQNQGDNLSNAPQNTVAFNKAEKVTSMFAGETKTVAMYDTKNETKPVDFKDATVRSLNPIIATAAI-NGSELLVTANAGQSGKASFEVTFKDNTDVKKEP |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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