Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | TYIVNQLKELGLYEGMREFFSDSGIKLTLLFLAMLFFFMVFSALKLIADTINELSMLFFSKDEEGNELKKIRGGSWIFLVASLTSLAFISYPLGIVLLLCLSCFVYFVYFVYKVNESLSGAGLVGFIFFQVIFWFSFLLAVIYACLKLYNSFMASLP |
1 | 5t77A2 | 0.10 | 0.10 | 3.75 | 1.04 | SPARKS-K | | TVVLSKISNDHLNDALKTTLFFTIPSMVGLIFIRFFYILIAYTLGLPFYGIYSTISRSYHAIKNTKTPFIAATIVSLSNIILDIIFGLKYGPIGVALATSIAGIIGVLYLLFSVPIKDFLKISLNSLIMLFVIYLTWFLIQILIGILVYLIFSSIFY |
2 | 6nf4A1 | 0.19 | 0.17 | 5.55 | 1.10 | FFAS-3D | | -------------QKNAELLSAQYGTNLLLLGVSVMLLLSFITVLMLVQLVWMLCYMIRRERERSGAS-WIRGGLTMLALLSLIMDAFRSAALGVYPIVHALHTISQVHFLWFHIKTFERFGVIHAVFTNLLLWCNGVLYYLYPFNIEYHIFVSAM- |
3 | 4ybqA | 0.10 | 0.10 | 3.57 | 1.07 | MUSTER | | RKEDEAEKAAGFIS-VWKLFRMQSLRWQLISTIVLMAGQQLSGVNAIYYYADQIYLSAGV-KSNDVQYVTAGTGAVNVFMTMVTVFVVELWGRRNLLLIGFSTCLTACIVLTVALALQNTISWMPYVSIVCVIVYVIGHAVGPPIPALFITEIFLQS |
4 | 4pypA2 | 0.11 | 0.10 | 3.47 | 1.09 | Neff-PPAS | | --------------TILELFRSPAYRQPILIAVVLQLSQQLSGINAVFYYSTSIFEKAGVQQ---PVYATIGSGIVNTAFTVVSLFVVQRAGRRTLHLIGLAGMAGCAILMTIALALLEQLPWMSYLSIVAIFGFVAFFEVGPPIPWFIVAELFSQG |
5 | 6eyuA | 0.11 | 0.11 | 4.10 | 1.01 | SPARKS-K | | LLFLYLPRKLDVPQKFGIIHFFIVVWSGLMYTNFLDYAWYMDWMVSTPLILLALGLTAFHGADTKDLLGALLGAEFTLVITGLLAQAQSITPYYVGVLLLLGVVYLLAKPFREIAEESSARAYKILAGYIGIFFLSYPTVWYISGSIALVVLPFFCK |
6 | 4q65A2 | 0.15 | 0.12 | 4.08 | 0.99 | FFAS-3D | | ------------------------GLIVTLTFFSMLFWAFASSISLYIDSINAFAVMLCGVNRTVRIWGKFALGLGLMSAGFCILMVLGLAVMGFAELFIDPVAMSQIYMLLSGAIANYLAGVIADQTFDQITWGALACVGVVLMIWLYQA------ |
7 | 1nekC | 0.09 | 0.04 | 1.71 | 0.23 | HHpred | | ---LGSLSSPEGFEQASAIMGSFFVKFIMWGILTALAYHVVVGIRHMMMDFG-----------YLEEFEAGKRSAKISFVITVVLSLLAGVLV---------------------------------------------------------------- |
8 | 4ldsA | 0.11 | 0.11 | 3.90 | 1.03 | MUSTER | | DKELKEMKEINISESTWTVIKSPWLGRILIVGCIFAIFQQFIGINAVIFYSSSIFAKAGL-GEAASILGSVGIGTINVLVTIVAIFVVDKIDRKKLLVGGNIGMIASLLIMAILIWTIGIASSAWIIIVCLSLFIVFFGISWGPVLWVMLPEL--FP |
9 | 3rkoC | 0.09 | 0.08 | 3.17 | 0.93 | CNFpred | | GFFIAFAVKMPVHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAP--------IAMWLGVIGIFYGAWMAFA-QTDIKRLIAYTSVSHMGFVLIAIYTGS-QLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMG |
10 | 1vt4I3 | 0.18 | 0.12 | 3.95 | 0.57 | HHsearch-2 | | ---------------------------------------EYALHRSIVDHYN-IPKTFDSDDL-----IPPYLDQYFY---SHIHLKNIEHPERMTLFRM--VFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILD |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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