Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | MKVVYASTPEQEQKIKELVDYFYSNVFPIYFSDEDIMEFNRLKVLHTSTRHFEYFGTLKEAYQVIASLQTLISILETSQSKEKYYSLFVKNASILEEFDIYFPFTFSQFSETRN |
1 | 5j43F | 0.13 | 0.11 | 3.93 | 0.67 | SPARKS-K | | -KTVDKLNQKQESAIKKIDNTIKNAL-----KDHDIIGTLKDMVPKENGGYWDA---MQEMQNTLRGLRNHADTLKNVN-NPEAQAAYGRATDAINKIESALKGYGI------- |
2 | 5j43F | 0.11 | 0.10 | 3.48 | 0.77 | FFAS-3D | | -KTVDKLNQKQESAIKKIDNTIKNALK----DHDIIGTLKDMDGKPVPKENGGYWDAMQEMQNTLRGLRNHADTLKNVN-NPEAQAAYGRATDAINK--------IESALKGYG |
3 | 4p1mA | 0.13 | 0.09 | 3.04 | 0.24 | HHpred | | RSLRVNCPPDQRDALNQAADDL----------NQRLQDLKERRVTN------------TEQLVFIAALNISYELAQEKAKTRDYAASMEQRIRMLQQT---------------- |
4 | 5j43F | 0.18 | 0.15 | 4.83 | 0.79 | MUSTER | | -KTVDKLNQKQESAIKKIDNTIKNAL-----KDHDIIGTLKDM--PVPKENGGYWDAMQEMQNTLRGLRNHADTLKNVNNPGRATDAINKIESALKGYGI-------------- |
5 | 4b2fA | 0.16 | 0.13 | 4.39 | 0.49 | CNFpred | | ----------FMLKDNRLRRLFYSSL---NYDENKIKKLATI-LAQTSSSNDYHYTLIGLIFWTGFKIQEAFESAVNILTKDEQKRLIFNRTKTVKEI----QENFEKLMQERN |
6 | 5j1bA | 0.12 | 0.06 | 2.17 | 0.39 | HHsearch-2 | | NDGVSE-TLLAWRHIDFWTSEHNPATLSDPCTQNDITHAEED-------------------------------------------------------LEVSFPNPVKASFKIHD |
7 | 4rykA2 | 0.09 | 0.08 | 2.98 | 0.66 | Neff-PPAS | | -------DRGRLLFCHLFANLTDELIIQNKINNLVLEKLKEASETSGSF----------NSAFYRIVANYYQGAIWKEGEVEKGYRQAKRAIQTWKELHYLYSVVLKQFLEKEN |
8 | 5zi9A2 | 0.18 | 0.10 | 3.14 | 0.48 | HHsearch | | ---------------------------------------------VLP----GGLGTLDELFEALTLVQTQK--VT-RFPGEYWGGLVDWLRGTLVAQGKAAEKDLMLFHVTD- |
9 | 3clkB | 0.14 | 0.13 | 4.50 | 1.00 | SP3 | | YNLIIV-YEEQKHALLTAIERL---LLSIALTDDNLQLLQSSDVLSGFDDDRPFISSEDIGYQATNLLINEIGIAGIDQYPYTGRKRLAGYKKALKEANI--AINQEWIKPGDY |
10 | 4wpxA | 0.09 | 0.09 | 3.37 | 0.53 | PROSPECTOR2 | | QIQYTIPSDEQKTRISEAFELFVLRALGFDLPKQQTYDLVRHGQRPANWPHDQECPPVYRQFNLATAQALAGTLIRQRDPRDELRRAFRLFRKVCQQVGNNIPVDEDEFLRMSK |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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