>PF17310 (322 residues) GIFKIFEDVYERVRKILVPTTAYSWQTFIYLSVFSWVMSYFATGYIRDIIALCGWLFLIA GTAWYTTDDPLRVPGTFMPVGAVITGFLVSVFAFSNQEDVITSRTVVLWPTISALITAIP EFIEGSDTDSKTRIPKPDARQKIIVLVASCMMISCWLQFYFVLDKWLQEYPSLLAENFGR STFVITREEQQKIPTNGVVILDRLQPLVEEQIAEKPWSEVERWLLEANVRVGQLGREVLN NNLAQYEEKALWRVEPRVVNNKSGYRLDLLSIWTGPTANPRGYFLRKSCQIDPVATTPIN TTTNSRTPEEKKAVAEIQCDRL |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | GIFKIFEDVYERVRKILVPTTAYSWQTFIYLSVFSWVMSYFATGYIRDIIALCGWLFLIAGTAWYTTDDPLRVPGTFMPVGAVITGFLVSVFAFSNQEDVITSRTVVLWPTISALITAIPEFIEGSDTDSKTRIPKPDARQKIIVLVASCMMISCWLQFYFVLDKWLQEYPSLLAENFGRSTFVITREEQQKIPTNGVVILDRLQPLVEEQIAEKPWSEVERWLLEANVRVGQLGREVLNNNLAQYEEKALWRVEPRVVNNKSGYRLDLLSIWTGPTANPRGYFLRKSCQIDPVATTPINTTTNSRTPEEKKAVAEIQCDRL | |||||||||||||||||||
1 | 5k7vA | 0.11 | 0.08 | 3.02 | 0.81 | SPARKS-K | VVAEMIDILAESSKKSILARAAAVAEAIEEIARLATAAIQLIEALAISAIAELAKKAIEAIYRLAHTTDTFMARAIAAIANLAVTAILAIAALASNHTTEFMARAIAIAELAKKAIEAIYRLADNHTT-DKFMAAAIEAIALLATLAILAIALLAMAKAISAIAELAKKAIEAIYRLADNHT---SPTYIEKAIEAIEKIARKAIKAIEMLAKNITTEEYKEKAKSAIDEIREKAKEAIKRLEDNRT--------------------------------------------------------------------------- | |||||||||||||
2 | 5an8A | 0.12 | 0.09 | 3.30 | 0.79 | FFAS-3D | -LNKLLQAKWDRLIPRF-------CFNFLCYLVYMLIFTAVALLLGHILILLGGVYLLLGQLWYFWRRRLFIWISFMFEILFLLQALLTVLSQVLCFLAIEWYLPLLVSSLVLGWLNLL-YYTRGFQH------------TGIYSVMIQKVILRDLLRFLLVYLVFLFGFAVALVSLSREPLFKFTIGMGELAFQEYVLLLNMLIALMSETVNSVATDSWSIWKLQKAISVLEMENGYWWCRRKKQRAG----VMLTVGTRPDG-------------SPDERWCF----RVGEM---------------------------- | |||||||||||||
3 | 5vkqA | 0.14 | 0.10 | 3.30 | 0.31 | HHpred | -VQRYLQEL----WHG--SLTWASWKILLLLVAFIWIGFTFPVPIIKFMSYLTSHIYLMIHLSIVGITPIYPVLRLLVPLLIWLSGLLLFELTNPSDKSGLIKVLVLLLGMA-GVGVHVSAFLFV----------SKEYWPTLVQCFALAFLLAC-VQILIIIGDLLKFANFSPEDLFEKKNR--NRGYFSDVRMHPINSFELLFFATQDTPTQPYWVEYLFILIQTYQRIQALIRNM-HRTTAPSPLN------------------------------------------------------------------------- | |||||||||||||
4 | 5cwmA | 0.12 | 0.08 | 2.94 | 0.66 | MUSTER | DELKRVEKLVKEAEELLRQAKEKGSEEDLEKALRTAEEAAREAKKVLEQAEKEG-----PEVALRAVE-----------LVVRVAELLLRIAKESGSEEALERALRVAEEAARLAKRVLELAEKQGD---------PEVALRAVELVVRVAELLLRIAKESGSEEALERALRVAEEAARLAKRVLELAEKQGDPRRAVELVKRVAELLERIARESGSEEAKERAERVREEARELQERVKELRER------------------------------------------------------------------------------ | |||||||||||||
5 | 4he8G | 0.09 | 0.06 | 2.25 | 0.95 | CNFpred | AAFWVFLGFALAFAIKTPLFPLHAWLPPFHQENHPSGLADALGTLYVGVFAFFRFAIPLAPEGFAQA-----------QGLLLFLAALSALYGAWVAFAAKDFKTLLAYAGLSHMGVAALGVFS----------GTPEGAMGGLYLLAASGVYTGGLFLLAGRLYERTGTLEIGRYRG-----LAQS------APGLAALALILFLAMVGLPGLSGFPGEFLTLLGAYKASPWLAALAFLSVIA------------------------------------------------------------------------------ | |||||||||||||
6 | 6itcE | 0.14 | 0.02 | 0.85 | 0.64 | HHsearch-2 | RVTNFFKEVVRELKKVSWPNRKELVNYTAVVLATVAFFTVFFAVIDLGISQLIRLVF------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
7 | 5cwqA | 0.10 | 0.07 | 2.53 | 0.82 | Neff-PPAS | RRLQEARKRSEEARERGDLKELAEALIEEARAVQELARVACERGNSEEAERASEKAQRVLEEARKVSEEAREQGDDELALALIAIALAVLALAEVACCRGNSEEAERASEKAQRVLEEARKVSEEAREQG---------DDEVLALALIAIALAVLALAEVACCRG--------------------NKEEAERAYEDARRVEEEARKVKESAEEQGDSEVKRLAEEAEQLAREARRHVQECRGGWLEHHH------------------------------------------------------------------------ | |||||||||||||
8 | 3bo0B | 0.15 | 0.03 | 0.94 | 0.56 | HHsearch | ATVAFAREARTEVRKVIWPTRKPTKDEYLAVAKVTA-LGISLLGIIGYIIHVPATYIKGI-----LK--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
9 | 5ezmA | 0.07 | 0.06 | 2.39 | 0.90 | SP3 | GGFLPWAGIFPKLWTAMRARFRPALMAGIWAIAIFVFFSISRSKLPGYIVPVIPALGILAGVALDRLSPRSWGKQLIGMAIVAACGLLASPVVATLNANHIPNSFYRAYAVWVAVAFVVMLLGIAVAR-------LLLRRGVLPSVAVYAMGMYLGFTVALLGHETVGRPASGADQKLTPEMPLYGVQMLDHTLPLRHPLMDELTFGATVEPQRVDVDSFTKLWKNGQPSPDTYLALAPTLSMYVVARDWVVANVASLAGPQ------------------------------------------------------------ | |||||||||||||
10 | 3zheA | 0.09 | 0.08 | 3.25 | 0.98 | PROSPECTOR2 | QVTEKFKRYCNQLEKYGQTENVHSPVMAMLRRGRKQLIEIMKRDGDCTSSINKLWIVGYYHPFQFFIRDKEKNMLPDDKYPALWNMYIGDFHRYMPDEEIQKCLAVGYYVAQKLRLMILGQLADAPYKKGKFPQKESTDKLMVDFVIWALNEKSKRMDYQMTGIKIVNEFKAEIEQKLEFDWLASKLAMKKFGFQQFYNCFDTISTLYITIYSRTILAEAISWISDSAEILGSVFAKTKWNELNDLVMNHINSVFTSMSLTINPSISMTSFLLNGPISEPNVEFLSQLIYLVSVEFPPMEIIHDREESGP------LLRRIN | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |