Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | QTFQYSRGWTNGKRSFNAASPLLANGHLHRASELGLTDLYDLQDWSSDRRLERCLSQLQRSLIARNCVPGSDFNANRVDPDPENSAHPRLSNSNGENVLYSSANIPNRHRQSNELLEELSAAGGASAEPNVFGKH |
1 | 3hm8A2 | 0.07 | 0.07 | 2.73 | 0.83 | SPARKS-K | | ----RGDFLALDLGGTNFRVLLVRVTTGVQITSEIYSIPETVAQGSGQQLFDHIVDCIVDFQQKQGLSQSLPLGFTFSFPCRQLGLDQGILLNWTKG--FKASDCEGQD--VVSLLREAITRRQAVELNVVAIV- |
2 | 2m0gA | 0.14 | 0.12 | 4.04 | 0.53 | FFAS-3D | | KKRKRSR-WNQDTMEQKTVIP-------------GMPTVIPPGLTREQERVQLQIEDLTRKLRTGDLGIPPNPEDRSPSPEPIYNSEGKRLNTREFRT------RKKLEEERHNLITEMVALNPDFKPPADYKP- |
3 | 6dv9F | 0.10 | 0.03 | 1.11 | 0.25 | HHpred | | ---------------------------RSYYRGWQIATDLGIAEGTVKSRLHYAVRALRLTLQELGVTR------------------------------------------------------------------ |
4 | 1jvrA | 0.11 | 0.10 | 3.75 | 0.75 | MUSTER | | ---HMGQIHGLSPTPIPKAPRGLSTHHWLNF----LQAAYRLQPGPSDFDFQQLRRFLKLALKTPIWLNPIDYSLLASLIPKGYPGRVVNILVKNQVSPSAPAAPVPTPICPTTTPPPPPPPSPEAHVPPPYVEP |
5 | 2olcA | 0.11 | 0.04 | 1.33 | 0.40 | CNFpred | | ------------------------------------ADLDTIVPFDKRIGRKRLALETGTAFIEKR------------------------------------------FKTITDVIELFKLLV------------ |
6 | 2pffB | 0.14 | 0.13 | 4.32 | 0.45 | HHsearch-2 | | QTYHVEKVFTQGLNIFTPGRSYLKGATGHSQGLVTAVAIAETDSWESFFVSVKAITVLFFI--GVRCYEAYPNTSLPP-SILEDSLE---NNEGVPSPMLSISNLTQEQVQD--YVNKTN---SHLPAGKQVEIS |
7 | 3iykG | 0.07 | 0.07 | 2.73 | 0.85 | Neff-PPAS | | ----------DERRAVVESTRHKSFHTNDQWVQWMMKDSMDAQKVGLDDQSRNVAHSLHNCVVKIDSKKADTMSYHVEPIEDASKGCLHTRTMMWNHLVRIETFHAAQETLKPTYDIVVHAERRDRSQPFRQSRH |
8 | 5wsnA1 | 0.27 | 0.05 | 1.59 | 0.41 | HHsearch | | KQGFTDRGWGNGCGLFG-------KGSIDT-----CAK------------------------------------------------------------------------------------------------- |
9 | 4oojA1 | 0.10 | 0.07 | 2.76 | 0.59 | SP3 | | ---------------KSLRDKVKS------TVLSHYKDEDRIDGEKKDEKLNELITNLQNELVK-------ELVKSDPQYSKLSLSKDPRGKEINYDYLVNSLMLVDNDSEIGDWIDTILDA---TVDSTVWVA- |
10 | 3ucpA5 | 0.07 | 0.07 | 3.00 | 0.62 | PROSPECTOR2 | | ADFSASHALTHAADKPDNSCGTCHSAVPNTAVALADGSNGAPAHSKKPFERGFDFKVMIHQIHADTRSVRRLTTDAATFPENPADKGQLSLATLGNKPAFLASTGEATTATDSAVIGHFETNGGVYNAAAGTYTP |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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