Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | PAVAPTGQCPGGPSLPIECDPKRPWPQCPPQSYCYATNSVDVGPYFCCPIWSTYGAAWRPATPFYNYVPPMPANWPDVAKITANWPAAAIGLPVKA |
1 | 2nbiA2 | 0.24 | 0.19 | 5.85 | 1.01 | SPARKS-K | | SECADLELCPYDTCFLPFDDSSRP-PDCTNRPDC---DKLDFTCPTCCPTQCRPNPMFSPSSPPVCSPTMMPSPLPSPTE---------------- |
2 | 2zixA1 | 0.11 | 0.10 | 3.72 | 0.32 | FFAS-3D | | PLELR----PGEYRVLLCVDIGETRGRPELLRELHTVRKLHVGDF----VWVAQETNANPGELVLDHI-VERKRLDDLCSSIIDGRFREQKFRLKR |
3 | 2jyeA | 0.27 | 0.10 | 3.20 | 0.27 | HHpred | | -------------AMDVKCDMEV---SCPDGYTCCRLQS---GAWGCCPFTQAVCC---------------------------------------- |
4 | 2mk0A | 0.30 | 0.24 | 7.27 | 0.92 | MUSTER | | PSSQPSDECPDACFLPKS-DSARP-PDCTGRPDCNVLPFNNIGCPSCCPF------ECSPDNPMFT---PSPDGSPP--------NCSPTMLPSPS |
5 | 4losA | 0.17 | 0.04 | 1.36 | 0.64 | CNFpred | | -------------SFYSTCQSNGKWSNS--KLKCQPVD---------------------------------------------------------- |
6 | 2jyvA | 0.34 | 0.11 | 3.43 | 0.55 | HHsearch-2 | | -----AIQCPDSQ------------FECPDFSTCCVMVD---GSWGCCPMPQ-------------------------------------------- |
7 | 3gawA6 | 0.12 | 0.11 | 4.07 | 0.85 | Neff-PPAS | | NMRRPYFPVAVGKYYSYYCDEHFETPSGSYWDHIHCTQDGWSPAVPCCYFPYLENGYNQNHGRKFVQPGYALPKAQTTVTCMENWSPTPRCIRV-- |
8 | 1i8xA | 0.30 | 0.09 | 2.84 | 0.30 | HHsearch | | ---------------VIHCDAA---TICPDGTTCSLSPY---GVWYCSPFS--------------------------------------------- |
9 | 2mk0A | 0.27 | 0.22 | 6.72 | 0.71 | SP3 | | PSSQPSEECPIDACFLPKSDSARP-PDCTGRPDCNVLFPNNIGCPSCCP------FECSPDNPMFT---PSPDGSPPNCSPTML-PSPS------- |
10 | 2nbiA2 | 0.16 | 0.15 | 4.85 | 0.60 | PROSPECTOR2 | | QPSSQPTLCPYDTCFLPFDDSSRPPDCTDPSVNRPDCDKLSTAIDFTCP-----TCCPTQCRPDNPMFSPSPDGSPPV---CSPTMMPSPLPSPTE |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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