Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | MAARWRRILIVFVAAQVLCLVNTFEEEDVPEEWILLHVVQGQIGAGNYSYLRLNHEGKIVLQMQSLKGDADLYVSDMTLHPSFDEYELQSVTCGQDIVHVPAHFRRPVGIGIYGHPSHQESEFEMKVYYDRTVVQYPFGEASYNPEEMEANQKYSHSTEDESQDEESVFWTILIGILKLILEILF |
1 | 2luwA | 0.19 | 0.10 | 3.15 | 1.17 | HHpred | | -------------------------GNVLKNNTP----VSNLGNKGSEVFYTFTVDATAVVSISGGSGDADLYLKAG-SKPTTSSWDCRPYRYGNESCSVSAAPGTTYHVMIKGYS--NYSGVTLKLQY-------------------------------------------------------- |
2 | 2luwA | 0.19 | 0.10 | 3.15 | 2.46 | HHsearch-2 | | -------------------------GNVLKNNTP----VSNLGNKGSEVFYTFTVDATAVVSISGGSGDADLYLKAG-SKPTTSSWDCRPYRYGNESCSVSAAPGTTYHVMIKGYS--NYSGVTLKLQY-------------------------------------------------------- |
3 | 2luwA | 0.20 | 0.10 | 3.30 | 1.14 | Neff-PPAS | | ---------------------------NVLKNNTPVSNLTG--NKGSEVFYTFTVDATAVVSISGGSGDADLYLKAGSK-PTTSSWDCRPYRYGNESCSVSAAPGTTYHVMIKGYS--NYSGVTLKLQY-------------------------------------------------------- |
4 | 2luwA | 0.19 | 0.10 | 3.15 | 2.62 | HHsearch | | -------------------------GNVLKNNTP----VSNLGNKGSEVFYTFTVDATAVVSISGGSGDADLYLKAG-SKPTTSSWDCRPYRYGNESCSVSAAPGTTYHVMIKGYSN--YSGVTLKLQY-------------------------------------------------------- |
5 | 2luwA | 0.16 | 0.09 | 2.86 | 1.08 | FFAS03 | | ---------------------------NVLKNNTPVSNLTGNKGSEVFYTFTVDRNATAVVSISGGSGDADLYLKAGS-KPTTSSWDCRPYRYGNESCSVSAAPGTTYHVMIKGYSNYSGVTLKLQ----------------------------------------------------------- |
6 | 3afgA2 | 0.15 | 0.08 | 2.56 | 1.47 | HHsearch-2 | | ----------------------------------AKLTFTGYVSNKGSQSHQFTISGFVTATLYWSGSDLDLYLYDPNG-----NQVDYSYYYGFEKVGYYNPTAGTWTIKVVSYS--GSANYQVDVVSDGSLGQP------------------------------------------------- |
7 | 3afgA2 | 0.13 | 0.07 | 2.42 | 1.02 | Neff-PPAS | | ----------------------------------AKLTFTGYVSNKGSQSHQFTISGFVTATLYWSGSDLDLYLYDPN---GNQVDYSYTAYYGFEKVGYYNPTAGTWTIKVVSYSG--SANYQVDVVSDGSLGQP------------------------------------------------- |
8 | 3afgA2 | 0.15 | 0.08 | 2.56 | 1.47 | HHsearch | | ----------------------------------AKLTFTGYVSNKGSQSHQFTISGFVTATLYNSGSDLDLYLYDPNG-----NQVDYSYYYGFEKVGYYNPTAGTWTIKVVSYS--GSANYQVDVVSDGSLGQP------------------------------------------------- |
9 | 3afgA2 | 0.13 | 0.07 | 2.42 | 0.90 | SPARKS-K | | ----------------------------------AKLTFTGYVSNKGSQSHQFTISGFVTATLYWDNSDLDLYLYDPNGN---QVDYSYTAYYGFEKVGYYNPTAGTWTIKVVSYSGS--ANYQVDVVSDGSLGQP------------------------------------------------- |
10 | 3afgA2 | 0.15 | 0.08 | 2.55 | 0.63 | FFAS-3D | | ------------------------------------LTFTGYVSNKGSQSHQFTISGTATLYWDNSGSDLDLYLYDPNGN---QVDYSYTAYYGFEKVGYYNPTAGTWTIKVVSYSG--SANYQVDVVSDGSLGQ-------------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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