Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| Seq | MSLDIFERGVQDPFSEACDNEDVKDLLSVSTEDINPNVVTANTSPISSSDFHGEYRPVEEIQYPQKSSSFYMDNNNNNINNKNRNTRNGIGSSLRKIRTAPHKLGSLSPLMTQEPFHNLQKATWEEEQERQNEESTSPLCFPLRRNRANSSSFIHHLSRQSTNTNSNNNSGIFESPQFLNKQTNNNTINFSNTTTPTRCNSVTSKPLSRHSSCFAIPTHIYGLEKYVLSELDA |
1 | 5yfpH | 0.08 | 0.08 | 3.20 | 1.17 | SPARKS-K | | LELKRVRANINDLNEVLDQCTKEKRLQLQDQIDQERMRRDRSSVLILEKFWDTELDQLFKNFINSTKGRHILMNSANWMELNTTTGKPLQMVQIFILNIADKSRDKQNDFIVSQPLKDVTVTQEEFSTKRLLFKFSNSNSSLYECRDADECSRLLDVIRKAKDDLCDIFHVEEENSKRIRESFRYLQSTQQTPGRENNRSPNKNKRRSMGQRLKFLDEGVEEIDIELARLRFE |
2 | 2tmaA | 0.08 | 0.08 | 3.08 | 2.09 | Neff-PPAS | | -RSKQLEDELVSLQKKLKGTEDELDKYSEALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSEGKCAELEEEIKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLK |
3 | 4k0mC | 0.06 | 0.05 | 2.21 | 1.11 | PROSPECTOR2 | | KVYTIDEAARTAKFDETVEVHAK-------LGIDPRRSDQNVRGTVSLPHGLGKQVRVLAIAKGEKIKEAEEAGADYVGGEEIIQAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA-----------------AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA-------------------AA |
4 | 5yfpH2 | 0.08 | 0.06 | 2.52 | 1.16 | SPARKS-K | | --------------------------------MRRDRSSVLILEKFWDTELDQLFKNVEGAQKNSTKGRHILMNSANWMELNTTTGKPLQMVQILVLIADKSRDKQN--DFIVSQCYPLKDVTVTQEEFSTKRKFSNSNSSLYECRDADECSRLLDVIRKAKDDLCDIFHVEEENSKRIRESFRYLQSTQQTPGRENNRSPNKNKRRSMGGSITP------------------ |
5 | 4bmlA | 0.09 | 0.08 | 3.11 | 0.58 | FFAS-3D | | YATKLFSGEVFTAF------NNASIFKGLVRSYDLRGGKSKQFMFTGKLSAGYHT------PGTPIVGDAGIKANEKTLVMDDLLVSSQFVYSLDEIFSQYSTRAEVSKQIGEALATHYDERIARVLAKASAEASPGFHVNIGAGNTNDAQAIVDGFFEADERSAPQEGRVAVLSPRQYYSLISSVDTNILNREIGNSQGDMNSGKGLYS---------IAGIRILKSNNLAG |
6 | 2pffB | 0.15 | 0.13 | 4.35 | 0.46 | HHpred | | -------TGHSQGLVTAVAIAETDSWESFFVSVRKAIPNTSSISNLTQEQVQDYVNKTNSHLPAGKQVEISLVNGAKNLVSGPPQSLYGLNLTLRKAKA-PSGLD------------QSRIPFSERKLKFSNRFLPVASPFHSHLLVPASDLINKDLVKNNVSFNAKD----IQIPVYDTFDGRVLSGSIS-----ERIVDCIIRLPVKGASGLGVLTHRNGVRVIVAGTLDI |
7 | 5mabA | 0.07 | 0.07 | 2.94 | 0.79 | MUSTER | | TLSQQYLDDVRS---GAIVIEGDSAAVSELILKRDIPIPTPNAFGSGPAGSNNPTHAYRGLNLSTCDGLRNGSTEQPARAIFTPGEDPKNAIIGRRLRANRMPLGIAFNNPTDSAPILILAGAPNDEHFTKEILPLFATDNTFGPDTPHCTT--HFSNQEPPSFHTTYEGIMLGADSVAKGVDNATKVIIPGDPEASKVFQHLTEPPGIDPSEDRDHPNTQILFAWIGAKCE- |
8 | 2pffB | 0.20 | 0.19 | 6.04 | 0.99 | HHsearch-2 | | LSHGSLEHVLLVPTFENCYLEGNDILAKLLQENDTTLVKTKEIKNY-ITARIMAKRPFDKKSN----SALFRAVGEGN---AQLVNTDDYFEELRLYQTYHVLVGDL-IKFSAETLSELIRTTLDAEKNPSNTPD-----KDYLLSIPISCPLIGQLLGFTPSQGLVTAVAIAEDSWENNEGVPSPMLSISNLTYVNKTNSPAGKQVSLNLVVSGPPQSLYGLNLTAPSGLDQ |
9 | 2bsgA | 0.05 | 0.05 | 2.27 | 1.71 | Neff-PPAS | | -NKKDISDLKTLTSEHTEILNGTNNTVDSILADIIRNDLLWIKRELMKHRIINNTDVITSQGIRLSLTIEVGNLREELVYSRLNEIDTKQTTVESDISAIKTSISNTDNIASINLEIKQRLTVIETSIIKGQIKDNTTSILRANVSWLNQIVSLLNRVSTIETSVSGLNNAVQNLQVEIGNNSAGIKGQVVALNTLVNGTNPNGSTVEERGLTNSIKANETNIASVTQEVNTA |
10 | 2uy1A1 | 0.14 | 0.03 | 0.88 | 0.40 | HHsearch | | SLESLFGRCLKKSYN-----------LDLWMLYIEYVRKV------------SKLYEVYEF-TLGQFE--------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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